LOCUS BC096298 2200 bp mRNA linear HUM 04-JAN-2007
DEFINITION Homo sapiens cyclic nucleotide gated channel alpha 3, mRNA (cDNA
clone MGC:116975 IMAGE:40007383), complete cds.
ACCESSION BC096298
VERSION BC096298.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2200)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2200)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAY-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 2 Row: o Column: 14.
FEATURES Location/Qualifiers
source 1..2200
/db_xref="H-InvDB:HIT000335586"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:116975 IMAGE:40007383"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TTCATCCA sequenced from
the forward primer"
gene 1..2200
/gene="CNGA3"
/gene_synonym="CCNC1"
/gene_synonym="CCNCa"
/gene_synonym="CCNCalpha"
/gene_synonym="CNG3"
/db_xref="GeneID:1261"
/db_xref="HGNC:HGNC:2150"
/db_xref="MIM:600053"
CDS 27..2111
/gene="CNGA3"
/gene_synonym="CCNC1"
/gene_synonym="CCNCa"
/gene_synonym="CCNCalpha"
/gene_synonym="CNG3"
/codon_start=1
/product="cyclic nucleotide gated channel alpha 3"
/protein_id="AAH96298.1"
/db_xref="GeneID:1261"
/db_xref="HGNC:HGNC:2150"
/db_xref="MIM:600053"
/translation="MAKINTQYSHPSRTHLKVKTSDRDLNRAENGLSRAHSSSEETSS
VLQPGIAMETRGLADSGQGSFTGQGIARLSRLIFLLRRWAARHVHHQDQGPDSFPDRF
RGAELKEVSSQESNAQANVGSQEPADRGRSAWPLAKCNTNTSNNTEEEKKTKKKDAIV
VDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDV
LVRARTGFLEQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFN
RLLKFSRLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDS
WVYPNISIPEHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVVDFLVGVLIF
ATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKT
VDEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDY
ICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTA
NIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAGADPK
DLEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQVKGGGDKPLADGEV
PGDATKTEDKQQ"
BASE COUNT 532 a 586 c 638 g 444 t
ORIGIN
1 ggggctaaat gtgacaaacc gagaagatgg ccaagatcaa cacccaatac tcccacccct
61 ccaggaccca cctcaaggta aagacctcag accgagatct caatcgcgct gaaaatggcc
121 tcagcagagc ccactcgtca agtgaggaga catcgtcagt gctgcagccg gggatcgcca
181 tggagaccag aggactggct gactccgggc agggctcctt caccggccag gggatcgcca
241 ggctgtcgcg cctcatcttc ttgctgcgca ggtgggctgc caggcatgtg caccaccagg
301 accagggacc ggactctttt cctgatcgtt tccgtggagc cgagcttaag gaggtgtcca
361 gccaagaaag caatgcccag gcaaatgtgg gcagccagga gccagcagac agagggagaa
421 gcgcctggcc cctggccaaa tgcaacacta acaccagcaa caacacggag gaggagaaga
481 agacgaaaaa gaaggatgcg atcgtggtgg acccgtccag caacctgtac taccgctggc
541 tgaccgccat cgccctgcct gtcttctata actggtatct gcttatttgc agggcctgtt
601 tcgatgagct gcagtccgag tacctgatgc tgtggctggt cctggactac tcggcagatg
661 tcctgtatgt cttggatgtg cttgtacgag ctcggacagg ttttctcgag caaggcttaa
721 tggtcagtga taccaacagg ctgtggcagc attacaagac gaccacgcag ttcaagctgg
781 atgtgttgtc cctggtcccc accgacctgg cttacttaaa ggtgggcaca aactacccag
841 aagtgaggtt caaccgccta ctgaagtttt cccggctctt tgaattcttt gaccgcacag
901 agacaaggac caactacccc aatatgttca ggattgggaa cttggtcttg tacattctca
961 tcatcatcca ctggaatgcc tgcatctact ttgccatttc caagttcatt ggttttggga
1021 cagactcctg ggtctaccca aacatctcaa tcccagagca tgggcgcctc tccaggaagt
1081 acatttacag tctctactgg tccaccttga cccttaccac cattggtgag accccacccc
1141 ccgtgaaaga tgaggagtat ctctttgtgg tcgtagactt cttggtgggt gttctgattt
1201 ttgccaccat tgtgggcaat gtgggctcca tgatctcgaa tatgaatgcc tcacgggcag
1261 agttccaggc caagattgat tccatcaagc agtacatgca gttccgcaag gtcaccaagg
1321 acttggagac gcgggttatc cggtggtttg actacctgtg ggccaacaag aagacggtgg
1381 atgagaagga ggtgctcaag agcctcccag acaagctgaa ggctgagatc gccatcaacg
1441 tgcacctgga cacgctgaag aaggttcgca tcttccagga ctgtgaggca gggctgctgg
1501 tggagctggt gctgaagctg cgacccactg tgttcagccc tggggattat atctgcaaga
1561 agggagatat tgggaaggag atgtacatca tcaacgaggg caagctggcc gtggtggctg
1621 atgatggggt cacccagttc gtggtcctca gcgatggcag ctacttcggg gagatcagca
1681 ttctgaacat caaggggagc aagtcgggga accgcaggac ggccaacatc cgcagcattg
1741 gctactcaga cctgttctgc ctctcaaagg acgatctcat ggaggccctc accgagtacc
1801 ccgaagccaa gaaggccctg gaggagaaag gacggcagat cctgatgaaa gacaacctga
1861 tcgatgagga gctggccagg gcgggcgcgg accccaagga ccttgaggag aaagtggagc
1921 agctggggtc ctccctggac accctgcaga ccaggtttgc acgcctcctg gctgagtaca
1981 acgccaccca gatgaagatg aagcagcgtc tcagccaact ggaaagccag gtgaagggtg
2041 gtggggacaa gcccctggct gatggggaag ttcccgggga tgctacaaaa acagaggaca
2101 aacaacagtg aaaatgcagc atctgtctcc tgcttcacag ggtcgactgt cagggtgacc
2161 gtatgtggcc gcagctgtgt ggcatggaac ttggtcaggg
//