LOCUS BC093044 2427 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens lysosomal-associated membrane protein 1, mRNA (cDNA clone MGC:111070 IMAGE:30390596), complete cds. ACCESSION BC093044 VERSION BC093044.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2427) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2427) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Michael Brownstein cDNA Library Preparation: Invitrogen Corp cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 196 Row: j Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7669500. FEATURES Location/Qualifiers source 1..2427 /db_xref="H-InvDB:HIT000334535" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:111070 IMAGE:30390596" /tissue_type="Testis" /clone_lib="NIH_MGC_180" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..2427 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /db_xref="GeneID:3916" /db_xref="HGNC:HGNC:6499" /db_xref="MIM:153330" CDS 150..1403 /gene="LAMP1" /gene_synonym="CD107a" /gene_synonym="LAMPA" /gene_synonym="LGP120" /codon_start=1 /product="lysosomal-associated membrane protein 1" /protein_id="AAH93044.1" /db_xref="GeneID:3916" /db_xref="HGNC:HGNC:6499" /db_xref="MIM:153330" /translation="MAAPGSARRPLLLLLLLLLLGLMHCASAAMFMVKNGNGTACIMA NFSAAFSVNYDTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTLTL NFTRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQ VHMNNVTVTLHDATIQAYLSNSSFSRGETRCEQDRPSPTTAPPAPPSPSPSPVPKSPS VDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTL ELHSEGTTVLLFQFGMNASSSRFFLQGIQLNTILPDARDPAFKAANGSLRALQATVGN SYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGSVEECLLDENSMLIPIAVGGAL AGLVLIVLIAYLVGRKRSHAGYQTI" BASE COUNT 526 a 661 c 669 g 571 t ORIGIN 1 cagtggccgg gcctcttgcg tctggtaacg ccgctgtctc taacgccagc ccttggcgcc 61 cgcgccccgc caccgcagcg cccggcagtc cgcggcccaa ccgccgcccg cgcccccgct 121 ctccgcaccg tacccggccg cctcgcgcca tggcggcccc cggcagcgcc cggcgacccc 181 tgctgctgct actgctgttg ctgctgctcg gcctcatgca ttgtgcgtca gcagcaatgt 241 ttatggtgaa aaatggcaac gggaccgcgt gcataatggc caacttctct gctgccttct 301 cagtgaacta cgacaccaag agtggcccta agaacatgac ctttgacctg ccatcagatg 361 ccacagtggt gctcaaccgc agctcctgtg gaaaagagaa cacttctgac cccagtctcg 421 tgattgcttt tggaagagga catacactca ctctcaattt cacgagaaat gcaacacgtt 481 acagcgtcca gctcatgagt tttgtttata acttgtcaga cacacacctt ttccccaatg 541 cgagctccaa agaaatcaag actgtggaat ctataactga catcagggca gatatagata 601 aaaaatacag atgtgttagt ggcacccagg tccacatgaa caacgtgacc gtaacgctcc 661 atgatgccac catccaggcg tacctttcca acagcagctt cagcagggga gagacacgct 721 gtgaacaaga caggccttcc ccaaccacag cgccccctgc gccacccagc ccctcgccct 781 cacccgtgcc caagagcccc tctgtggaca agtacaacgt gagcggcacc aacgggacct 841 gcctgctggc cagcatgggg ctgcagctga acctcaccta tgagaggaag gacaacacga 901 cggtgacaag gcttctcaac atcaacccca acaagacctc ggccagcggg agctgcggcg 961 cccacctggt gactctggag ctgcacagcg agggcaccac cgtcctgctc ttccagttcg 1021 ggatgaatgc aagttctagc cggtttttcc tacaaggaat ccagttgaat acaattcttc 1081 ctgacgccag agaccctgcc tttaaagctg ccaacggctc cctgcgagcg ctgcaggcca 1141 cagtcggcaa ttcctacaag tgcaacgcgg aggagcacgt ccgtgtcacg aaggcgtttt 1201 cagtcaatat attcaaagtg tgggtccagg ctttcaaggt ggaaggtggc cagtttggct 1261 ctgtggagga gtgtctgctg gacgagaaca gcatgctgat ccccatcgct gtgggtggtg 1321 ccctggcggg gctggtcctc atcgtcctca tcgcctacct cgtcggcagg aagaggagtc 1381 acgcaggcta ccagactatc tagcctggtg cacgcaggca cagcagctgc aggggcctct 1441 gttcctttct ctgggcttag ggtcctgtcg aaggggaggc acactttctg gcaaacgttt 1501 ctcaaatctg cttcatccaa tgtgaagttc atcttgcagc atttactatg cacaacagag 1561 taactatcga aatgacggtg ttaattttgc taactgggtt aaatattttg ctaactggtt 1621 aaacattaat atttaccaaa gtaggatttt gagggtgggg gtgctctctc tgagggggtg 1681 ggggtgccgc tgtctctgag gggtgggggt gccgctgtct ctgaggggtg ggggtgccgc 1741 tctctctgag ggggtggggg tgccgctttc tctgaggggg tgggggtgcc gctctctctg 1801 agggggtggg ggtgctgctc tctccgaggg gtggaatgcc gctgtctctg aggggtgggg 1861 gtgccgctct aaattggctc catatcattt gagtttaggg ttctggtgtt tggtttcttc 1921 attctttact gcactcagat ttaagcctta caaagggaaa gcctctggcc gtcacacgta 1981 ggacgcatga aggtcactcg tggtgaggct gacatgctca cacattacaa cagtagagag 2041 ggaaaatcct aagacagagg aactccagag atgagtgtct ggagcgcttc agttcagctt 2101 taaaggccag gacgggccac acgtggctgg cggcctcgtt ccagtggcgg cacgtccttg 2161 ggcgtctcta atgtctgcag ctcaagggct ggcacttttt taaatataaa aatgggtgtt 2221 atttttattt ttttttgtaa agtgattttt ggtcttctgt tgacattcgg ggtgatcctg 2281 ttctgcgctg tgtacaatgt gagatcggtg cgttctcctg atgttttgcc gtggcttggg 2341 gattgtacac gggaccagct cacgtaatgc attgcctgta acaatgtaat aaaaagcctc 2401 tttcttttta aaaaaaaaaa aaaaaaa //