LOCUS BC072672 1236 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens high-mobility group nucleosome binding domain 1, mRNA (cDNA clone MGC:87801 IMAGE:6166317), complete cds. ACCESSION BC072672 VERSION BC072672.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1236) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1236) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: k Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48255932. FEATURES Location/Qualifiers source 1..1236 /db_xref="H-InvDB:HIT000264911" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87801 IMAGE:6166317" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1236 /gene="HMGN1" /db_xref="GeneID:3150" /db_xref="HGNC:HGNC:4984" /db_xref="MIM:163920" CDS 114..416 /gene="HMGN1" /codon_start=1 /product="high-mobility group nucleosome binding domain 1" /protein_id="AAH72672.1" /db_xref="GeneID:3150" /db_xref="HGNC:HGNC:4984" /db_xref="MIM:163920" /translation="MPKRKVSSTEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDK SSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD" BASE COUNT 385 a 241 c 280 g 330 t ORIGIN 1 ggcagcggca aggcagccca gtttcgcgaa ggctgtcggc gcgccgcggc ccgcaggcac 61 ccggcacgcg ccttccccgc aggcacccgg cacgcgcctt ccccgccgcc acgatgccca 121 agaggaaggt cagctccacc gaaggcgccg ccaaggaaga gcccaagagg agatcggcgc 181 ggttgtcagc taaacctcct gcaaaagtgg aagcgaagcc gaaaaaggca gcagcgaagg 241 ataaatcttc agacaaaaaa gtgcaaacaa aagggaaaag gggagcaaag ggaaaacagg 301 ccgaagtggc taaccaagaa actaaagaag acttacctgc ggaaaacggg gaaacgaaga 361 ctgaggagag tccagcctct gatgaagcag gagagaaaga agccaagtct gattaataac 421 catataccat gtcttatcag tggttcctgt ctcccttctt gtacaatcca gaggaatatt 481 tttatcaact attttgtaaa tgcaagtttt ttagtagctc tagaaacatt tttaagaagg 541 agggaatccc acctcatccc attttttaag tgtaaatgct tttttttaag aggtgaaatc 601 atttgctggt tgtttatttt ttggtacaac cagaaaatag tgtgggatat tgaattatgg 661 gaggctctga ctgtctcggg tgtcagctta acattccaca gatggggggt tagtttttat 721 atcctataat acaaagcata ttaaatggca atatggagtc agtcctgcat ttaatgtctt 781 gaacatttta aattacttct attaccatgt tgttttttag tagaattgtt tcctaaagaa 841 aaccactctt tgatcatggc tctctctgcc agaattgtgt gcactctgta acatctttgg 901 ttgtggtagt cctgttttcc taataacttt gttactgtgc tgtgaaagat tacagatttg 961 aacatgtagt gtacgtgcta ttgagttgtg aactggtggg ccgtatgtaa cagctgacca 1021 acgtgaagat actggtactt gatagcctct taaggaaaat ttgcttccaa attttaagct 1081 ggaaagtcac tggaataact ttaaaaaaga attacaatac atggcttttt agaatttcgt 1141 tacgtatgtt aagatttgtg tacaaattga aatgtctgta ctgatcctca accaataaaa 1201 tctcagttat gaaaaaaaaa aaaaaaaaaa aaaaaa //