LOCUS BC072423 3563 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens solute carrier family 1 (glutamate/neutral amino acid
transporter), member 4, mRNA (cDNA clone MGC:90209 IMAGE:6186177),
complete cds.
ACCESSION BC072423
VERSION BC072423.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3563)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3563)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: m Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314631.
FEATURES Location/Qualifiers
source 1..3563
/db_xref="H-InvDB:HIT000264868"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90209 IMAGE:6186177"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3563
/gene="SLC1A4"
/gene_synonym="ASCT1"
/gene_synonym="SATT"
/db_xref="GeneID:6509"
/db_xref="MIM:600229"
CDS 244..1842
/gene="SLC1A4"
/gene_synonym="ASCT1"
/gene_synonym="SATT"
/codon_start=1
/product="SLC1A4 protein"
/protein_id="AAH72423.1"
/db_xref="GeneID:6509"
/db_xref="MIM:600229"
/translation="MEKSNETNGYLDSAQAGPAAGPGAPGTAAGRARRCAGFLRRQAL
VLLTVSGVLAGAGLGAALRGLSLSRTQVTYLAFPGEMLLRMLRMIILPLVVCSLVSGA
ASLDASCLGRLGGIAVAYFGLTTLSASALAVALAFIIKPGSGAQTLQSSDLGLEDSGP
PPVPKETVDSFLDLARNLFPSNLVVAAFRTYATDYKVVTQNSSSGNVTHEKIPIGTEI
EGMNILGLVLFALVLGVALKKLGSEGEDLIRFFNSLNEATMVLVSWIMWYVPVGIMFL
VGSKIVEMKDIIVLVTSLGKYIFASILGHVIHGGIVLPLIYFVFTRKNPFRFLLGLLA
PFATAFATCSSSATLPSMMKCIEENNGVDKRISRFILPIGATVNMDGAAIFQCVAAVF
IAQLNNVELNAGQIFTILVTATASSVGAAGVPAGGVLTIAIILEAIGLPTHDLPLILA
VDWIVDRTTTVVNVEGDALGAGILHHLNQKATKKGEQELAEVKVEAIPNCKSEEETSP
LVTHQNPAGPVASAPELESKESVL"
BASE COUNT 763 a 993 c 942 g 865 t
ORIGIN
1 ctccagccgg cggctgctcc agggaggctg ggcgcgatcc tctccgcccg cggctccaac
61 ccgcactctg cgcctctcct cgcctttctc gcacctgctc ctgcgccagg ccgcgagacc
121 cccggggcgg cttcccagaa cctgcggagc acaactggcc gaccgaccca ttcattggga
181 accccgtctt ttgccagagc ccacgtcccc tgccacctct agctcggagc ggcgtgtagc
241 gccatggaga agagcaacga gaccaacggc taccttgaca gcgctcaggc ggggcctgcg
301 gccgggcccg gagctccggg gaccgcggcg ggacgcgcac ggcgttgcgc gggcttcctg
361 cggcgccaag cgctggtgct gctcaccgtg tccggggtgc tggcgggcgc gggcctgggc
421 gcggcgttgc gcgggctcag cctgagccgc acgcaggtca cctacctggc cttccccggc
481 gagatgctgc tccgcatgct gcgcatgatc atcctgccgc tggtggtctg cagcctggtg
541 tcgggcgccg cctccctcga tgccagctgc ctcgggcgtc tgggcggcat cgctgtcgcc
601 tactttggcc tcaccacact gagtgcctcg gcgctcgccg tggccttggc gttcatcatc
661 aagccaggat ccggtgcgca gacccttcag tccagcgacc tggggctgga ggactcgggg
721 cctcctcctg tccccaaaga gacggtggac tctttcctcg acctggccag aaacctgttt
781 ccctccaatc ttgtggttgc agctttccgt acgtatgcaa ccgattataa agtcgtgacc
841 cagaacagca gctctggaaa tgtaacccat gaaaagatcc ccataggcac tgagatagaa
901 gggatgaaca ttttaggatt ggtcctgttt gctctggtgt taggagtggc cttaaagaaa
961 ctaggctccg aaggagaaga cctcatccgt ttcttcaatt ccctcaacga ggcgacgatg
1021 gtgctggtgt cctggattat gtggtacgta cctgtgggca tcatgttcct tgttggaagc
1081 aagatcgtgg aaatgaaaga catcatcgtg ctggtgacca gcctggggaa atacatcttc
1141 gcatctatat tgggccatgt tattcatgga ggaattgttc tgccacttat ttattttgtt
1201 ttcacacgaa aaaacccatt cagattcctc ctgggcctcc tcgccccatt tgcgacagca
1261 tttgctacct gctccagctc agcgaccctt ccctctatga tgaagtgcat tgaagagaac
1321 aatggtgtgg acaagaggat cagcaggttt attctcccca tcggggccac cgtgaacatg
1381 gacggagcag ccatcttcca gtgtgtggcc gcggtgttca ttgcgcaact caacaacgta
1441 gagctcaacg caggacagat tttcaccatt ctagtgactg ccacagcgtc cagtgttgga
1501 gcagcaggcg tgccagctgg aggggtcctc accattgcca ttatcctgga ggccattggg
1561 ctgcctactc atgacctgcc tctgatcctg gctgtggact ggattgtgga ccggaccacc
1621 acggtggtga atgtggaagg ggatgccctg ggtgcaggca ttctccacca cctgaatcag
1681 aaggcaacaa agaaaggcga gcaggaactt gctgaggtga aagtggaagc catccccaac
1741 tgcaagtctg aggaggagac atcgcccctg gtgacacacc agaaccccgc tggccccgtg
1801 gccagtgccc cagaactgga atccaaggag tcggttctgt gatggggctg ggctttgggc
1861 ttgcctgcca gcagtgatgt cccaccctgt tcacccagcc gccagtcatg gacacagggc
1921 actgcccttg ccaactttta ccctcccaag caatgctttg gcccagtcgc tggcctgagg
1981 cttacctctc ggcactggca ttgggctccc cagccggaac tggttaccaa ggacaaggac
2041 actctgacat tcggcttgat ccatgtccag gtgcaactgt gtgtacacca gggatctgtt
2101 tggaaacaac cccttgagct gccaggctca agaaatcatg gactcacagg gtcctgtgtg
2161 gttacatctt ggaaaaaatg cagatgtatt tcactctccc cggtcagctc tgcatcaggt
2221 gttttctgag caaaccaagg gggtttatag tcatctgtcg cattgcctcg agttgcagta
2281 attgaaaaaa tgctcaaatt cttagccatg gctggccttt gctgagctgg gactcaggtg
2341 tttaaagagt ttgtgctata gctaggtgtg gatagcttct gatccctggg ttctgggaga
2401 ctgcaggtgc cgcacattgt caagttagaa atactccagg tgggtgttag cactgtggtg
2461 gtctctggtc cacagcctta ggtaaacaac ttagattctg aggtcaaaga aaaaaggaga
2521 gggaatgcag ccttgtgggg gagaagcggg gcagagggtt ctctaatcta atcaggacag
2581 gacaggtttc acatacaatt gtcccagttc gcatcccagc cctggggcac ttttctgctt
2641 ccttccagag gcctgggcct ctgataacac tttggctttt tctccattca cgctgatttg
2701 gcaaaaggcc agagatgggc ctccttccct ggggaggtgt gatgtagtta tcacattcag
2761 gacccttgtt gatttatcat ctattatttg aattcaactg gacactctgt aaaatgctgc
2821 actgcagcaa aaacaaaacc accaccaccc cagagaaaac catgtactaa ttggagtggg
2881 gtacccccat tcacaggttc ccaggtcccc tggctttggc tgatttcaaa atatagagcc
2941 ctttcttgcc agtacatcca agtttaaaat tatcagcgaa atggtccatg tttttccaat
3001 tacctgctga cacggttcta agctaagtga aggggaagat ctgagagcgt gctgtttgtg
3061 gctgttgatg catattcgtg atgtaacagg tcctggggcc tcactttacc ccatttgtaa
3121 aatggggcta atgtcacctg cctcttacct acctcagagg gatttggtga agcaaactgt
3181 taatcttcga aaacgaccat ttcacttctt ggatatcaag tgctaaccca gtatgttctt
3241 cttttttatg taagggacag ctttctccac agagtccttt ctgctggtga ggacagcatt
3301 tctgagcagg gctttgttct ctatgtgcat taggactttt atcatgccct tgttctgtgt
3361 gtagttactt gacagcatca aatgccgcct cttcctaatg tccttcaagt tttcatgaac
3421 tagcaacccc accttccacc atggttctgg gcgcctgatt ttgctgtgac tcccagaccc
3481 agccactgtt tctgccaccc tgtaacaggc cattaaagct ccccagtgtt cagcctcctt
3541 aaaaaaaaaa aaaaaaaaaa aaa
//