LOCUS BC071976 2260 bp mRNA linear HUM 06-JUL-2004
DEFINITION Homo sapiens chromosome 10 open reading frame 18, mRNA (cDNA clone
IMAGE:3939979), partial cds.
ACCESSION BC071976
VERSION BC071976.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2260)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2260)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923334.
FEATURES Location/Qualifiers
source 1..2260
/db_xref="H-InvDB:HIT000264782"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3939979"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..>2260
/gene="C10orf18"
/gene_synonym="bA318E3.2"
/gene_synonym="FLJ20360"
/db_xref="GeneID:54906"
CDS <1..>2260
/gene="C10orf18"
/gene_synonym="bA318E3.2"
/gene_synonym="FLJ20360"
/codon_start=3
/product="C10orf18 protein"
/protein_id="AAH71976.1"
/db_xref="GeneID:54906"
/translation="SVVPTLCSSSDNATLTHYVRPINAEPAFQAQEIPAGRMASLLKN
GEPEAELHKETTGPGTAGPQSNTTSSLKGERKAIHTLQDVSTCETKELLNVGVSSLCA
GPYQNTADTKENLSKEPLASFVSESFDTSVCGIATEHVEIENSGEGLRAEAGSETLGR
DGEVGVNSDMHYELSGDSDLDLLGDCRNPRLDLEDSYTLRGSYTRKKDVPTDGYESSL
NFHNNNQEDWGCSSWVPGMETSLPPGHWTAAVKKEEKCVPPYVQIRDLHGILRTYANF
SITKELKDTMRTSHGLRRHPSFSANCGLPSSWTSTWQVADDLTQNTLDLEYLRFAHKL
KQTIKNGDSQHSASSANVFPKESPTQISIGAFPSTKISEAPFLHPAPRSRSPLLVTVV
ESDPRPQGQPRRGYTASSLDSSSSWRERCSHNRDLRNSQRNHTVSFHLNKLKYNSTVK
ESRNDISLILNEYAEFNKVMKNSNQFIFQDKELNDVSGEATAQEMYLPFPGRSASYED
IIIDVCTNLHVKLRSVVKEACKSTFLFYLVETEDKSFFVRTKNLLRKGGHTEIEPQHF
CQAFHRENDTLIIIIRNEDISSHLHQIPSLLKLKHFPSVIFAGVDSPGDVLDHTYQEL
FRAGGFVISDDKILEAVTLVQLKEIIKILEKLNGNGRWKWLLHYRENKKLKEDERVDS
TAHKKNIMLKSFQSANIIELLHYHQCDSRSSTKAEILKCLLNLQIQHIDARFAVLLTD
KPTIPSKKKKKK"
BASE COUNT 713 a 520 c 489 g 538 t
ORIGIN
1 gctcagtggt ccccacgctt tgttcttcct cagacaatgc tacattaacc cattatgtaa
61 gaccaataaa tgcagagcca gcgtttcaag cacaggaaat accagcaggc agaatggcca
121 gtttgcttaa gaatggtgag cctgaagctg agttacataa agaaaccaca ggtccaggca
181 ctgctggccc tcagtccaac accacatctt ctctaaaagg tgaacgcaaa gccatccaca
241 cgctgcaaga tgtgtcaaca tgtgaaacaa aggagctatt gaatgtcggg gtttcctccc
301 tttgtgctgg tccctaccaa aatacagcag acaccaagga aaacctcagt aaagagcctt
361 tggcctcctt tgtttcagaa tcctttgata cttctgtttg tggaatagcc acagagcacg
421 tagaaattga gaacagtggg gaggggctca gggctgaggc tggttctgaa accctaggca
481 gagatggaga ggtcggtgtg aattccgaca tgcactatga actctctgga gattctgatc
541 tagacctgct tggtgattgt agaaatccca gactggattt ggaggattct tatactttaa
601 gaggtagtta caccaggaaa aaagatgttc ccacagatgg ctatgagtcg tcgttgaact
661 tccacaacaa caaccaagag gactggggct gctctagctg ggttccaggc atggagacga
721 gcctccctcc cgggcactgg actgctgcgg taaagaaaga agagaagtgt gtgccgcctt
781 acgtccaaat ccgagatctc cacgggatcc tcaggactta cgccaacttc tctataacaa
841 aagaactcaa agataccatg agaacttcac acggcctgag gaggcacccg agtttcagtg
901 caaactgtgg cctgcccagc tcctggacaa gcacttggca ggtggcagac gacctcaccc
961 agaacacttt agacctggag tatctgcgtt ttgcacataa actaaaacag accataaaga
1021 atggggattc tcagcattct gcctcctctg ccaatgtctt tccaaaggag tcaccaaccc
1081 agatctccat tggtgctttc ccttcgacaa aaatctctga ggccccattt ctgcatcctg
1141 cacctaggag cagaagcccc cttctggtaa cagttgtgga gtcagatccc agaccacagg
1201 ggcagcccag gagaggctac acagccagca gtctggacag ctcttcctct tggagagaga
1261 gatgtagtca taatagagat cttagaaatt ctcaaagaaa tcacactgtt tcattccacc
1321 tcaacaaact gaaatacaac agtactgtga aggaatctcg gaatgatatt tcacttattc
1381 tcaatgagta tgctgaattc aacaaggtga tgaagaatag caaccaattc attttccaag
1441 acaaagagct aaatgatgtt tctggagaag ccactgctca agagatgtat ctgcctttcc
1501 caggacggtc agcctcctat gaagacataa tcatagacgt gtgcaccaat ttgcacgtca
1561 aactaagaag tgttgtgaaa gaggcttgta aaagtacctt cctgttctac cttgtcgaaa
1621 cagaagacaa atcattcttt gtaagaacaa agaaccttct gaggaaagga ggccatacag
1681 aaattgaacc tcagcacttc tgtcaagctt tccacagaga gaatgataca ctaatcatca
1741 tcatcagaaa tgaagatata tcatcacatt tgcatcagat tccttctttg ctgaagctga
1801 agcatttccc cagtgtcatc tttgctggag tagacagccc tggagatgtt cttgatcaca
1861 cctaccaaga actgtttcgt gcaggaggct ttgtgatatc agatgacaag atactagaag
1921 ctgtaacatt agttcaactg aaggaaatta tcaaaatcct ggaaaaacta aatggaaatg
1981 gaagatggaa gtggttgctt cactacaggg aaaataaaaa gctaaaagaa gatgaaagag
2041 tggattcaac tgcacataag aagaacataa tgttgaagtc atttcagagt gcaaatatca
2101 ttgaattgct tcattatcac cagtgtgact ctcgatcatc aacaaaagca gaaattctga
2161 aatgtttgct aaacctgcaa attcagcata ttgatgccag gtttgctgtc ctcctaacag
2221 acaagcctac tatccccagc aaaaaaaaaa aaaaaaaaaa
//