LOCUS BC071774 1869 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PDZ and LIM domain 2 (mystique), mRNA (cDNA clone
MGC:88416 IMAGE:4593207), complete cds.
ACCESSION BC071774
VERSION BC071774.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1869)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1869)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40288188.
FEATURES Location/Qualifiers
source 1..1869
/db_xref="H-InvDB:HIT000264593"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88416 IMAGE:4593207"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1869
/gene="PDLIM2"
/gene_synonym="FLJ34715"
/db_xref="GeneID:64236"
/db_xref="HGNC:HGNC:13992"
/db_xref="MIM:609722"
CDS 401..1459
/gene="PDLIM2"
/gene_synonym="FLJ34715"
/codon_start=1
/product="PDZ and LIM domain 2 (mystique)"
/protein_id="AAH71774.1"
/db_xref="GeneID:64236"
/db_xref="HGNC:HGNC:13992"
/db_xref="MIM:609722"
/translation="MALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLR
PGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNGDSSLEVLAT
RFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLAC
SPGLPAADRLSYSGRPGSRQAGLGRAGDSAVLVLPPSPGPRSSRPSMDSEGGSLLLDE
DSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRA
LATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYC
EKHARQRYSAPATLSSRA"
BASE COUNT 334 a 642 c 579 g 314 t
ORIGIN
1 agagtcgggt agacggcagc gggagcggtg gcgtctcccc gccttccctc cctcccgggc
61 ctgggcgccc agccggacag gggagcggca gccaggtgag cgcgcccacc tgcgcctctc
121 cgcgcggccc gccctccccg gcgccgggct cctctccgcg cccctgtcgg cgcggaaccc
181 tggcctcgtc cgcggcccag ctccctggag cctcgcatca gcgggggcgc ccccgcgagc
241 tgcgctctcc ccggccggag cgctcctcct ccagccccca gcccgcaggg tactttgccc
301 tcggagcgaa ggaggctcca gaactggtag agccgggcca tcgggctggg cacctccccg
361 cggcgcccgc agcgcggagt ccactgaccg gctcaaaggt atggcgttga cggtggatgt
421 ggccgggcca gcgccctggg gcttccgtat cacagggggc agggatttcc acacgcccat
481 catggtgact aaggtggccg agcggggcaa agccaaggac gctgacctcc ggcctggaga
541 cataatcgtg gccatcaacg gggaaagcgc ggagggcatg ctgcatgccg aggcccagag
601 caagatccgc cagagcccct cgcccctgcg gctgcagctg gaccggtctc aggctacgtc
661 tccagggcag accaatgggg acagctcctt ggaagtgctg gcgactcgct tccagggctc
721 cgtgaggaca tacactgaga gtcagtcctc cttaaggtcc tcctactcca gcccaacctc
781 cctcagcccg agggccggca gccccttctc accaccaccc tctagcagct ccctcactgg
841 agaggcggcc atcagccgca gcttccagag tctggcatgt tccccgggcc tccccgctgc
901 tgaccgcctg tcctactcag gccgccctgg aagccgacag gccggcctcg gccgcgctgg
961 cgactcggcg gtgctggtgc tgccgccttc cccgggccct cgttcctcca ggcccagcat
1021 ggactcggaa gggggaagcc tcctcctgga cgaggactcg gaagtcttca agatgctgca
1081 ggaaaatcgc gagggacggg cggccccccg acagtccagc tcctttcggc tcttgcagga
1141 agccctggag gctgaggaga gaggtggcac gccagccttc ttgcccagct cactgagccc
1201 ccagtcctcc ctgcccgcct ccagggccct ggccacccct cccaagctcc acacttgtga
1261 gaagtgcagt accagcatcg cgaaccaggc tgtgcgcatc caggagggcc ggtaccgcca
1321 ccccggctgc tacacctgtg ccgactgtgg gctgaacctg aagatgcgcg ggcacttctg
1381 ggtgggtgac gagctgtact gtgagaagca tgcccgccag cgctactccg cacctgccac
1441 cctcagctct cgggcctgag cccgccatgc cctcagcctg cctcactgct gggccagggt
1501 catgcctata taagttggca tggcagggac aatggtgggc agttgctctt acatgagcta
1561 agtttggaga cctgaggccc ctttgtcctc gctgggtggg ccaaggtctg ggacctgtct
1621 tggactgtgg gagactcacc ctcaccttgc caggcctctc ccctgcagga ctggcattgc
1681 actagtctga ggtggccact gcctttgatc aacctttgtg tgccagggtc taagtagggt
1741 cgaacacaga agtgggaagg agaggggtgg gccaggggct aatggtgtca ctgtgtaaag
1801 tttttgacat actagctcta taaatatatg aatatggaca aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaa
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