LOCUS BC071644 1547 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens family with sequence similarity 108, member A1, mRNA
(cDNA clone MGC:87804 IMAGE:5242996), complete cds.
ACCESSION BC071644
VERSION BC071644.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1547)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1547)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361948.
FEATURES Location/Qualifiers
source 1..1547
/db_xref="H-InvDB:HIT000264471"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87804 IMAGE:5242996"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1547
/gene="FAM108A1"
/gene_synonym="MGC5244"
/db_xref="GeneID:81926"
/db_xref="HGNC:HGNC:28756"
CDS 343..1275
/gene="FAM108A1"
/gene_synonym="MGC5244"
/codon_start=1
/product="FAM108A1 protein"
/protein_id="AAH71644.1"
/db_xref="GeneID:81926"
/db_xref="HGNC:HGNC:28756"
/translation="MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPG
PGGAGAAPLGTLRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCM
YVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSER
NLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGM
RVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEP
LWVEGAGHNDIELYSQYLERLRRFISQELPSQRA"
BASE COUNT 277 a 539 c 500 g 231 t
ORIGIN
1 gtgcaggagg ccgggcaggg gtgcggaggg accgacggac gcacgggcgg gcggccggga
61 gccatggagc gcggccctgg ggcccggggg cgcgggccgg ggtgggcttc ccacggcacg
121 acatggagac ctgtggttgc gaggctccct ggggctcggc ttggaccgcg atggggctgg
181 gccctggcct cctaacgggg ctgctgtctg gggcggtagc tgggggggcg ctctcccccc
241 tgcccgcgac tcggagcacc cccacccctc ccctgccggg ccaggccggg cggcgttgtt
301 ggcgggggcc ccggtggagg cccggcctgg gcggcgcccg ccatgaatgg gctgtcgctg
361 agtgagctct gctgcctctt ctgctgcccg ccctgccccg gccgcatcgc tgccaagctc
421 gccttcctgc cgccggaggc cacctactcc ctggtgcctg agcccgagcc ggggcctggt
481 ggggccgggg ccgccccctt ggggaccctg agagcctcct cgggcgcacc cgggcgctgg
541 aagctgcacc tgacggagcg tgccgacttc cagtacagcc agcgcgagct ggacaccatc
601 gaggtcttcc ccaccaagag cgcccgcggc aaccgcgtct cctgcatgta tgttcgctgc
661 gtgcctggtg ccaggtacac ggtcctcttc tcgcacggca atgccgtgga cctgggccag
721 atgagcagct tctacattgg cctgggctcc cgcctccact gcaacatctt ctcctacgac
781 tactccggct acggtgccag ctcgggcagg ccttccgaga ggaacctcta tgccgacatc
841 gacgccgcct ggcaggccct gcgcaccagg tacggcatca gcccggacag catcatcctg
901 tacgggcaga gcatcggcac ggtgcccacc gtggacctgg cctcgcgcta cgagtgtgcc
961 gcggtggtgc tgcactcgcc gctcacctcg ggcatgcgcg tcgccttccc cgacaccaag
1021 aagacctact gcttcgacgc cttccctaac atcgagaagg tgtccaagat cacgtctccc
1081 gtgctcatca tccacggcac ggaggacgag gtgatcgact tctcgcacgg gctggcgctc
1141 tacgagcgct gccccaaggc ggtggagccg ctgtgggtgg agggcgccgg gcacaacgac
1201 atcgagctct acagccagta cctggagcgc ctgcgtcgct tcatctccca ggagctgccc
1261 agccagcgcg cctagcggcg gccccaaccg gccggacctc agcaataagg cggcccccgg
1321 acctcacccc gcgccggccc ccacccaggg gctgcatgtg gaccccccgg gcggcccagg
1381 ggaccccgcc ccgacccagg ggctgtggac gatgtacagg caacagagct acgcactcct
1441 ttccttttgg aagcaagaag aaaatacgtg aaaacggaaa ttaaagattt aaaattttaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//