LOCUS BC071643 1225 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens high-mobility group nucleosome binding domain 1, mRNA (cDNA clone MGC:87800 IMAGE:5549431), complete cds. ACCESSION BC071643 VERSION BC071643.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1225) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1225) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 166 Row: p Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 48255932. FEATURES Location/Qualifiers source 1..1225 /db_xref="H-InvDB:HIT000264470" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87800 IMAGE:5549431" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1225 /gene="HMGN1" /db_xref="GeneID:3150" /db_xref="HGNC:HGNC:4984" /db_xref="MIM:163920" CDS 113..415 /gene="HMGN1" /codon_start=1 /product="high-mobility group nucleosome binding domain 1" /protein_id="AAH71643.1" /db_xref="GeneID:3150" /db_xref="HGNC:HGNC:4984" /db_xref="MIM:163920" /translation="MPKRKVSSTEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDK SSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD" BASE COUNT 373 a 242 c 280 g 330 t ORIGIN 1 cggacgcgtg ggcagcccag tttcgcgaag gctgtcggcg cgccgcggcc cgcaggcacc 61 cggcacgcgc cttccccgca ggcacccggc acgcgccttc cccgccgcca cgatgcccaa 121 gaggaaggtc agctccaccg aaggcgccgc caaggaagag cccaagagga gatcggcgcg 181 gttgtcagct aaacctcctg caaaagtgga agcgaagccg aaaaaggcag cagcgaagga 241 taaatcttca gacaaaaaag tgcaaacaaa agggaaaagg ggagcaaagg gaaaacaggc 301 cgaagtggct aaccaagaaa ctaaagaaga cttacctgcg gaaaacgggg aaacgaagac 361 tgaggagagt ccagcctctg atgaagcagg agagaaagaa gccaagtctg attaataacc 421 atataccatg tcttatcagt ggtccctgtc tcccttcttg tacaatccag aggaatattt 481 ttatcaacta ttttgtaaat gcaagttttt tagtagctct agaaacattt ttaagaagga 541 gggaatccca cctcatccca ttttttaagt gtaaatgctt ttttttaaga ggtgaaatca 601 tttgctggtt gtttattttt tggtacaacc agaaaatagt gtgggatatt gaattatggg 661 aggctctgac tgtctcgggt gtcagcttaa cattccacag atggggggtt agtttttata 721 tcctataata caaagcatat taaatggcaa tatggagtca gtcctgcatt taatgtcttg 781 aacattttaa attacttcta ttaccatgtt gttttttagt agaattgttt cctaaagaaa 841 accactcttt gatcatggct ctctctgcca gaattgtgtg cactctgtaa catctttggt 901 tgtggtagtc ctgttttcct aataactttg ttactgtgct gtgaaagatt acagatttga 961 acatgtagtg tacgtgctat tgagttgtga actggtgggc cgtatgtaac agctgaccaa 1021 cgtgaagata ctggtacttg atagcctctt aaggaaaatt tgcttccaaa ttttaagctg 1081 gaaagtcact ggaataactt taaaaaagaa ttacaataca tggcttttta gaatttcgtt 1141 acgtatgtta agatttgtgt acaaattgaa atgtctgtac tgatcctcaa ccaataaaat 1201 ctcagttatg aaaaaaaaaa aaaaa //