LOCUS BC070161 1482 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens structural maintenance of chromosomes 4, mRNA (cDNA
clone IMAGE:4252738), partial cds.
ACCESSION BC070161
VERSION BC070161.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1482)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1482)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: b Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50658062.
FEATURES Location/Qualifiers
source 1..1482
/db_xref="H-InvDB:HIT000264119"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4252738"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_62"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1482
/gene="SMC4"
/gene_synonym="CAPC"
/gene_synonym="hCAP-C"
/db_xref="GeneID:10051"
/db_xref="HGNC:HGNC:14013"
/db_xref="MIM:605575"
CDS 106..>1482
/gene="SMC4"
/gene_synonym="CAPC"
/gene_synonym="hCAP-C"
/codon_start=1
/product="SMC4 protein"
/protein_id="AAH70161.1"
/db_xref="GeneID:10051"
/db_xref="HGNC:HGNC:14013"
/db_xref="MIM:605575"
/translation="MPRKGTQPSTARRREEGPPPPSPDGASSDAEPEPPSGRTESPAT
AAETASEELDNRSLEEILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILG
PFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTV
EVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGKKKTFKDVGNLLRSHGI
DLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEI
LNEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYELQKRI
AEMETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTEKKLNKITKFIEENKEKFTQ
LDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALK
KKKKKKKKK"
BASE COUNT 564 a 259 c 322 g 337 t
ORIGIN
1 attttcgagt gaaggacccg gagccgaaac accggtagga gcggggaggt gggtactaca
61 caaccgtctc cagccttggt ctgagtggac tgtcctgcag cgaccatgcc ccgtaaaggc
121 acccagccct ccactgcccg gcgcagagag gaagggccgc cgccgccgtc ccctgacggc
181 gccagcagcg acgcggagcc tgagccgccg tccggccgca cggagagccc agccaccgcc
241 gcagagactg caagtgagga acttgataat agaagtttag aagagatttt gaacagcatt
301 cctcctcccc cgcctccagc aatgaccaat gaagctggag ctcctcggct tatgataact
361 catattgtaa accagaactt caaatcctat gctggggaga aaattctggg acctttccat
421 aagcgctttt cctgtattat cgggccaaat ggcagtggca aatccaatgt tattgattct
481 atgctttttg tgtttggcta tcgagcacaa aaaataagat ctaaaaaact ctcagtatta
541 atacataatt ctgatgaaca caaggacatt cagagttgta cagtagaagt tcattttcaa
601 aagataattg ataaggaagg ggatgattat gaagtcattc ctaacagtaa tttctatgta
661 tccagaacgg cctgcagaga taatacttct gtctatcaca taagtggaaa gaaaaagaca
721 tttaaggatg ttggaaatct tcttcgaagc catggaattg acttggacca taatagattt
781 ttaattttac agggtgaagt tgaacaaatt gctatgatga aaccaaaagg ccagactgaa
841 cacgatgagg gtatgcttga atatttagaa gatataattg gttgtggacg gctaaatgaa
901 cctattaaag tcttgtgtcg gagagttgaa atattaaatg aacacagagg agagaagtta
961 aacagggtaa agatggtgga aaaggaaaag gatgccttag aaggagagaa aaacatagct
1021 atcgaatttc ttaccttgga aaatgaaata tttagaaaaa agaatcatgt ttgtcaatat
1081 tatatttatg agttgcagaa acgaattgct gaaatggaaa ctcaaaagga aaaaattcat
1141 gaagatacca aagaaattaa tgagaagagc aatatactat caaatgaaat gaaagctaag
1201 aataaagatg taaaagatac agaaaagaaa ctgaataaaa ttacaaaatt tattgaggag
1261 aataaagaaa aatttacaca gctagatttg gaagatgttc aagttagaga aaagttaaaa
1321 catgccacga gtaaagccaa aaaactggag aaacaacttc aaaaagataa agaaaaggtt
1381 gaagaattta aaagtatacc tgccaagagt aacaatatca ttaatgaaac aacaaccaga
1441 aacaatgccc tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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