LOCUS BC070154 1348 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosome binding domain 1, mRNA
(cDNA clone MGC:88134 IMAGE:6495327), complete cds.
ACCESSION BC070154
VERSION BC070154.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1348)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1348)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48255932.
FEATURES Location/Qualifiers
source 1..1348
/db_xref="H-InvDB:HIT000264112"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88134 IMAGE:6495327"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1348
/gene="HMGN1"
/db_xref="GeneID:3150"
/db_xref="HGNC:HGNC:4984"
/db_xref="MIM:163920"
CDS 123..425
/gene="HMGN1"
/codon_start=1
/product="high-mobility group nucleosome binding domain 1"
/protein_id="AAH70154.1"
/db_xref="GeneID:3150"
/db_xref="HGNC:HGNC:4984"
/db_xref="MIM:163920"
/translation="MPKRKVSSTEGAAKEEPKRRSARLSAKPPAKVEAKPKKAAAKDK
SSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENGETKTEESPASDEAGEKEAKSD"
BASE COUNT 489 a 242 c 286 g 331 t
ORIGIN
1 gggaggagtg gcagcggcaa ggcagcccag tttcgcgaag gctgtcggcg cgccgcggcc
61 cgcaggcacc cggcacgcgc cttccccgca ggcacccggc acgcgccttc cccgccgcca
121 cgatgcccaa gaggaaggtc agctccaccg aaggcgccgc caaggaagag cccaagagga
181 gatcggcgcg gttgtcagct aaacctcctg caaaagtgga agcgaagccg aaaaaggcag
241 cagcgaagga taaatcttca gacaaaaaag tgcaaacaaa agggaaaagg ggagcaaagg
301 gaaaacaggc cgaagtggct aaccaagaaa ctaaagaaga cttacctgcg gaaaacgggg
361 aaacgaagac tgaggagagt ccagcctctg atgaagcagg agagaaagaa gccaagtctg
421 attaataacc atataccatg tcttatcagt ggtccctgtc tcccttcttg tacaatccag
481 aggaatattt ttatcaacta ttttgtaaat gcaagttttt tagtagctct agaaacattt
541 ttaagaagga gggaatccca cctcatccca ttttttaagt gtaaatgctt ttttttaaga
601 ggtgaaatca tttgctggtt gtttattttt tggtacaacc agaaaatagt gtgggatatt
661 gaattatggg aggctctgac tgtctcgggt gtcagcttaa cattccacag atggggggtt
721 agtttttata tcctataata caaagcatat taaatggcaa tatggagtca gtcctgcatt
781 taatgtcttg aacattttaa attacttcta ttaccatgtt gttttttagt agaattgttt
841 cctaaagaaa accactcttt gatcatggct ctctctgcca gaattgtgtg cactctgtaa
901 catctttggt tgtggtagtc ctgttttcct aataactttg ttactgtgct gtgaaagatt
961 acagatttga acatgtagtg tacgtgctat tgagttgtga actggtgggc cgtatgtaac
1021 agctgaccaa cgtgaagata ctggtacttg atagcctctt aaggaaaatt tgcttccaaa
1081 ttttaagctg gaaagtcact ggaataactt taaaaaagaa ttacaataca tggcttttta
1141 gaatttcgtt acgtatgtta agatttgtgt acaaattgaa atgtctgtac tgatcctcaa
1201 ccaataaaat ctcagttatg aaaataaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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