LOCUS BC070044 3816 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens golgi associated, gamma adaptin ear containing, ARF
binding protein 3, mRNA (cDNA clone MGC:87095 IMAGE:4814878),
complete cds.
ACCESSION BC070044
VERSION BC070044.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3816)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3816)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336265.
FEATURES Location/Qualifiers
source 1..3816
/db_xref="H-InvDB:HIT000264002"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87095 IMAGE:4814878"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3816
/gene="GGA3"
/gene_synonym="KIAA0154"
/db_xref="GeneID:23163"
/db_xref="HGNC:HGNC:17079"
/db_xref="MIM:606006"
CDS 14..2086
/gene="GGA3"
/gene_synonym="KIAA0154"
/codon_start=1
/product="golgi associated, gamma adaptin ear containing,
ARF binding protein 3"
/protein_id="AAH70044.1"
/db_xref="GeneID:23163"
/db_xref="HGNC:HGNC:17079"
/db_xref="MIM:606006"
/translation="MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQ
IAVRLLAHKIQSPQEWEALQALTYLGDRVSEKVKTKVIELLYSWTMALPEEAKIKDAY
HMLKRQGIVQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKSKNPDDLQEA
NKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHYSQEDSSDGDRELMKEL
FDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVINGEVATL
TLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQASGPPR
SRSSSQAEATLGPSSTSNALSWLDEELLCLGLADPAPNVPPKESAGNSQWHLLQREQS
DLDFFSPRPGTAACGASDAPLLKPSAPSSSSSQAPLPPPFPAPVVPASVPAPSAGSSL
FSTGVAPALAPKVEPAVPGHHGLALGNSALHHLDALDQLLEEAKVTSGLVKPTTSPLI
PTTTPARPLLPFSTGPGSPLFQPLSFQSQGSPPKGPELSLASIHVPLESIKPSSALPV
TAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQ
PPSGTELSPFSPIQPPAAITQVMLLANPLKEKVRLRYKLTFALGEQLSTEVGEVDQFP
PVEQWGNL"
BASE COUNT 897 a 1132 c 992 g 795 t
ORIGIN
1 gggcggctgc aatatggcgg aggcggaagg ggaaagcctg gagtcctggc tcaataaagc
61 caccaatcct tccaaccgcc aggaggactg ggaatacata attggcttct gtgatcagat
121 caacaaggag ctggaagggc cacagatcgc cgtccgactg ctggcccaca agatccagtc
181 cccacaggaa tgggaggcgc tccaggccct gacgtacctg ggggacaggg tgtctgagaa
241 agtgaagacc aaggttattg agctgctgta cagctggacc atggccctgc cagaagaagc
301 aaagatcaaa gacgcctacc acatgctgaa gagacagggc atagtgcagt ctgacccacc
361 aattcctgtg gataggacgc tgatcccctc tccaccacct cgtcccaaaa accctgtttt
421 tgatgatgag gagaagtcca agcttttagc caagctgctg aaaagcaaaa acccagatga
481 cctgcaggag gccaacaagc tcatcaagtc catggtgaag gaagacgagg cacggatcca
541 gaaggtgacc aagcgtctgc acacgttaga ggaagttaac aacaacgtga gactgctcag
601 tgagatgctg cttcattaca gccaggagga ctcttcggac ggggacagag agctgatgaa
661 ggagctgttt gatcagtgtg agaacaagag gcggacttta tttaaactcg ccagtgagac
721 tgaggacaat gataacagtt tgggggacat cctgcaagcc agtgacaacc tctcccgggt
781 catcaactct tacaaaacaa ttattgaagg gcaggtcatc aatggcgagg tggctacctt
841 aacactgcct gactcggaag gaaacagtca gtgcagtaac caaggcacgc tcatcgacct
901 tgcggagctg gacacgacca acagtttgtc ctccgtgttg gccccagcac ctactccacc
961 ctcctcaggc atcccaatcc tccctccacc accccaggcc tcaggacctc cacggagccg
1021 ctcctctagc caggccgagg ccaccctggg gcccagcagc acaagcaacg ccctctcctg
1081 gctggacgag gagctactct gcttgggcct cgccgaccca gcccctaatg ttcctcccaa
1141 agagtcagct gggaacagcc agtggcacct gctccagagg gaacagtccg acctggactt
1201 cttcagcccc aggccgggga ccgctgcctg tggcgcctcc gatgctcctc tgctcaagcc
1261 ctcagccccc tcctcaagca gctcccaagc tccactgccg cctcccttcc cagctcctgt
1321 ggtcccagcc agtgttcctg cacccagtgc gggctcctcc ttgttttcta ctggagtggc
1381 cccagccttg gccccaaaag ttgagcccgc agtccctggg caccatggct tggcgttggg
1441 caacagcgcg ctgcaccacc tggatgccct cgatcagctt ctagaagagg ccaaagtgac
1501 ctcgggcttg gtgaaaccca ctacctcccc tctcatcccc accaccaccc cagccaggcc
1561 cctcctgccc ttctccacgg ggcccggcag cccgctcttc cagccactga gtttccagtc
1621 ccagggcagc cccccgaagg ggcctgagct ctccctggcc agcatccacg tgcccctgga
1681 atcgatcaag cctagcagtg cccttcctgt gacagcctac gataaaaacg gcttccgcat
1741 cctcttccac tttgccaagg agtgtccccc aggacgacct gacgtgctgg tggtggtggt
1801 gtccatgctg aacacggctc ccttacctgt caagagcatc gtgctgcagg ctgcagtgcc
1861 caagtcaatg aaagtgaagt tgcagccacc ttctgggaca gaactctctc catttagccc
1921 catccagcca cctgcagcca tcacccaggt catgttgctg gccaatccac tgaaggagaa
1981 ggtgcggctt cggtataagc tgaccttcgc cctgggggag cagctgagca cagaggtggg
2041 cgaggtggac cagttccctc ctgtggaaca gtgggggaac ctatgacccc agaggacgct
2101 gtgatctcca ccttgaagcc aggcaggctg ccctgagacg aggagggctc tggtcccgtc
2161 actctccatg ccctgacaac agtgcttgta gctttgatgt ggaacagggg ccctgggcat
2221 ttctgctgag aaccaaactg ctgctgtgat aacctctcct ttggccccta aaaggacctg
2281 tttttatcta cctgtgtgac ttgaagtggc catatgctgt caggggtgcg gagtggcccc
2341 tgacttcact gctgtcccgg gaacatggac ccccaggctt ggcgtaggtg tttgcttcct
2401 tctactggca ttcactgaag ccactggggt agggggtggg gggtgggagt ctctaaagag
2461 agactgtcat gggtcattcc ccacaagagc cacatcctca cacctgacag atgcacggcc
2521 caaggggctg cagccctgtt gcaattccat gcttcccccg ccaaccagct cctgctgcca
2581 tccccaggga ggtggcccag gaaggtgcct ggcccagaat aaggaactgg catactgcaa
2641 agtccccagc cctgcctctg gtggacagca tcgtcctgga atggccacgg agtgatgagt
2701 tgtgtgcttg tccctggcag tggcaggctg tgtcctatgg acatcttggc aggacatgga
2761 atttggcctc atgacaggcc caactaggga taggaaggaa aatgaagaga gccagtattt
2821 ccccttctcc agaagcaggt actcagcttt ctgggaaaag cgtgcctcca gccgtgggga
2881 caggccatcc tactgactac ctcttgcttg gcatgaaata aactgctatc ctccccttgg
2941 aatctaccgc cactctacat cctactgctt tggcctccct ctcctctcac cagatggcat
3001 gtggtgtggc acctgtggct ggacacagga ggcctcagga tcacaaatgt tacactagac
3061 atatgtccta atgtgctgcc cagaaacctc aactgttccc cagctactga ggggcactgt
3121 cagcgagatg ttgggtctgg aggtgatgag atcgggccac acttgagctg agtcaccaga
3181 ccctattgct tcaacagtgc ttggcccccg ccagcttgtc ccagccactc tagctgctgg
3241 atgtgatcct gggacatgta ctccaagcct ccgtcacaaa aaaaaaaatc accagctgcc
3301 atagacacgg gggaagcttg cggagcccag gtgaacaagc tcagcaatcg gacatctctg
3361 gggaaaggaa ggtggcacag accatgttcc ctggttcctc cctgcccctt gccaggcttc
3421 cttattcctt actatgggaa gaggtcatat cccttccctg cccctcgctg tctttagcaa
3481 gcaggtttca ctgcttcatt agaagaggac aagtcaaaag tgaatcattt ttcactactt
3541 aaggaataaa tccaagagct ttccagagac tggctgctgc agccctggga atgtctgtgg
3601 aattactatg tggaaatgga actttgtgtt atgctctaga cattacagtt atttgagtgt
3661 tactcgttac tgttgaggtc agtgcttcgt ggcaaatggc tgtactggat atcccagctc
3721 tgctgccctt gttttgctgc atgttaaata aaaccatttt cactgtaaaa aaaaaaaaaa
3781 aaaaaaaaaa aaaaaaaaga aaaaaaaaaa aaaaaa
//