LOCUS BC069197 3091 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens autocrine motility factor receptor, mRNA (cDNA clone
MGC:78441 IMAGE:6650026), complete cds.
ACCESSION BC069197
VERSION BC069197.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3091)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3091)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 54 Row: p Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21071000.
FEATURES Location/Qualifiers
source 1..3091
/db_xref="H-InvDB:HIT000263357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:78441 IMAGE:6650026"
/tissue_type="Ovary, teratocarcinoma"
/clone_lib="NIH_MGC_109"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3091
/gene="AMFR"
/gene_synonym="GP78"
/gene_synonym="RNF45"
/db_xref="GeneID:267"
/db_xref="HGNC:HGNC:463"
/db_xref="MIM:603243"
CDS 212..2143
/gene="AMFR"
/gene_synonym="GP78"
/gene_synonym="RNF45"
/codon_start=1
/product="autocrine motility factor receptor"
/protein_id="AAH69197.1"
/db_xref="GeneID:267"
/db_xref="HGNC:HGNC:463"
/db_xref="MIM:603243"
/translation="MPLLFLERFPWPSLRTYTGLSGLALLGTIISAYRALSQPEAGPG
EPDQLTASLQPEPPAPARPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLI
QCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHL
MVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGMHTLAF
MAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHH
IHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEEL
AVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNRVRE
EHQGENLDENLVPVAAAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILGIT
QASNSQLNAMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILEGRIQVPFPTQRSD
SIRPALNSPVERPSSDQEEGETSAQTERVPLDLSPRLEETLDFGEVEVEPSEVEDFEA
RGSRFSKSADERQRMLVQRKDELLQQARKRFLNKSSEDDAASESFLPSEGASSDPVTL
RRRMLAAAAERRLQKQQTS"
BASE COUNT 655 a 854 c 862 g 720 t
ORIGIN
1 ctcttccgcg ccggcagggg cagcagcggg agcagcgcgg ggcggagcgg cgccagcagc
61 caggagcggc ccggcccggc ccggcgcggc ggcggcggcg gcagcggcag cggcagcgac
121 gccagagccc gtgggcgccg ttcgcgaggc cgccgcagag gcccggccgc agcgcaggga
181 agcctggggg ccagaggtcg ccgctgccgc catgccgctg ctcttcctcg agcgcttccc
241 ctggcccagc ctccgcacct acacgggcct cagcggcctg gccctgctgg gcaccatcat
301 cagcgcctac cgcgcgctca gccagcccga ggccggcccc ggcgagccgg accagctaac
361 ggcctcgctg cagcctgagc cgccggcgcc cgcccggccg agcgccgggg gaccccgggc
421 ccgcgatgtg gcccagtacc tgctctcaga cagcctcttc gtgtgggttc tagtaaatac
481 cgcttgctgt gttttgatgt tggtggctaa gctcatccag tgtattgtgt ttggccctct
541 tcgagtgagt gagagacagc atctcaaaga caaattttgg aattttattt tctacaagtt
601 cattttcatc tttggtgtgc tgaatgtcca gacagtggaa gaggtggtca tgtggtgcct
661 ctggtttgcc ggacttgtct ttctgcacct gatggttcag ctctgcaagg atcgatttga
721 atatctttcc ttctcgccca ccacgccgat gagcagccac ggtcgagtcc tgtccctgtt
781 ggttgccatg ctgctttcct gctgtggact ggcggccgtc tgctccatca ccggctacac
841 ccacggaatg cacaccttgg ctttcatggc tgcagagtct cttcttgtga cagtgaggac
901 tgctcatgtg attttacgat acgtaattca cctctgggac ctcaaccacg aagggacgtg
961 ggaaggaaag gggacgtatg tctattacac agactttgtc atggagctca ctctcctgtc
1021 cctggacctc atgcaccata ttcacatgtt gttatttggc aacatctggt tatccatggc
1081 cagcctggtc atctttatgc agctgcgtta cctgtttcat gaggtgcaac gtcgaattcg
1141 tcggcacaag aactatctac gtgtggttgg aaacatggag gccaggtttg cagttgcaac
1201 tccagaggag ctggctgtca acaatgacga ctgtgccatc tgttgggact ccatgcaggc
1261 tgcgcggaaa ctgccctgtg gacatctttt ccacaactcc tgtcttcgtt cctggctaga
1321 acaagacacc tcctgtccaa catgcagaat gtctcttaat attgccgaca ataatcgtgt
1381 cagggaagaa catcaaggag agaacttgga tgagaatttg gttcctgtag cagcagccga
1441 agggagacct cgcttaaacc aacacaatca cttcttccat ttcgatgggt ctcggattgc
1501 gagctggctg ccgagttttt cggttgaagt gatgcacacc accaacattc ttggcattac
1561 gcaggccagc aactcccagc tcaatgcaat ggctcatcag attcaagaga tgtttcccca
1621 ggttccatac catctggtac tgcaggacct ccagctgaca cgctcagttg aaataacaac
1681 agacaatatt ttagaaggac ggattcaagt accttttcct acacagcggt cagatagcat
1741 cagacctgca ttgaacagtc ctgtggaaag gccaagcagt gaccaggaag agggagaaac
1801 ttctgctcag accgagcgtg tgccactgga cctcagtcct cgcctggagg agacgctgga
1861 cttcggcgag gtggaagtgg agcccagtga ggtggaagac ttcgaggctc gtgggagccg
1921 cttctccaag tctgctgatg agagacagcg catgctggtg cagcgtaagg acgaactcct
1981 ccagcaagct cgcaaacgtt tcttgaacaa aagttctgaa gatgatgcgg cctcagagag
2041 cttcctcccc tcggaaggtg cgtcctctga ccccgtgacc ctgcgtcgaa ggatgctggc
2101 tgccgccgcg gaacggaggc ttcagaagca gcagacctcc tagcgctccc ttgccttcct
2161 cagctgcctc ctgcgccctg tgcccgactg actggaggag gcctgtccca attctgcccg
2221 ctccatggaa aagcgggctt gactgcattg ccgctgtata aagcatgtgg tcttatagtg
2281 tttggacagc tgataaattt aatccttctt tgtaatactt tctatgtgac atttctcttc
2341 cccttagaaa cactgcaaat tttaactgta ggtatgatct cttctggtgt tgactggact
2401 gcttggggtg ggggacgatc aggaggaagt gagcagtcgc ctgcctgcag caggcagctt
2461 ctactcctgc ctcatgcata cgtcccacaa atgcaggtgt cctgagcacc acacccagtg
2521 ggaagagtgt gggggaggcg cacagtgtga gcccgccccc acgtcgtggg gtaacatctg
2581 ttatcaaact gctgtcgttg ttgtggaagc atgtagactg tgccagaggc cagacccacg
2641 ggctcatgca cccctgagcc agcagggcat cttggaaaag gaactcttgg ttcgatacct
2701 ggagcagagg aggggaaagt ccagggctat agggtgtgat gaagtcaccc ctttctgtcc
2761 cactacatct gggactgact ttccgagcct ccagtccaaa gccggcttga tttccgtgaa
2821 ctctggtgct cctgcatctc atgagtgtgc cccatgggtc ccctcccctc tcagcatttc
2881 cttgtcccgt ctggacctgg ggagtggtta ggcagcaagc tttggtttat ggttttcatt
2941 cattggtgaa gtaaattagg cagtgctaaa gcctgtgggt ttggtccttg aacaagatgt
3001 gggccttgca agatgggaga gtaaaccttg aagggcttta ttaaagaaat aaaaaagaac
3061 ttttgtatct ttaaaaaaaa aaaaaaaaaa a
//