LOCUS BC068012 4283 bp mRNA linear HUM 23-AUG-2004 DEFINITION Homo sapiens ataxin 2-like, mRNA (cDNA clone IMAGE:6169527), partial cds. ACCESSION BC068012 VERSION BC068012.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4283) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4283) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (22-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: o Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27262646. FEATURES Location/Qualifiers source 1..4283 /db_xref="H-InvDB:HIT000262887" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6169527" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..4283 /gene="ATXN2L" /gene_synonym="A2D" /gene_synonym="A2LG" /gene_synonym="A2LP" /gene_synonym="A2RP" /db_xref="GeneID:11273" /db_xref="MIM:607931" CDS <1..3298 /gene="ATXN2L" /gene_synonym="A2D" /gene_synonym="A2LG" /gene_synonym="A2LP" /gene_synonym="A2RP" /codon_start=2 /product="ATXN2L protein" /protein_id="AAH68012.1" /db_xref="GeneID:11273" /db_xref="MIM:607931" /translation="RGASSRRGLLSPPPTPRGSPRPPTAGPGCPIPLASRALQRGPSP GPLSPSLLSNSPSGRCHHVEASAATTALPAPAAASPCLGPVAAAGSGLRRGAEGILAP QPPPPQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNSRMLHFLTAVVGSTCDV KVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFKPSDVMLVHF RNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDP NEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESSPQYRL RIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPRGGVRCSSS RGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTLSSPSN RPSGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPVTSSVS DPGVGSISPASPKISLAPTDVKELSTKEPGRTLEPQELARIAGKVPGLQNEQKRFQLE ELRKFGAQFKLQPSSSPENSLDPFPPRILKEEPKGKEKEVDGLLTSEPMGSPVSSKTE SVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIKGEDKDEGPVAEQVKKSTL NPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQI HMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAG PPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAP SPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIH HQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQ SGVPALSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRAEGLQV GQDARVLGGE" BASE COUNT 909 a 1440 c 1114 g 820 t ORIGIN 1 gcgcggcgct tcctcgcgcc gcggtcttct ctctccaccc ccgacaccgc ggggctcccc 61 ccgcccgccc acggcgggcc ccggctgccc gatccccctc gcttcccgcg ctctccagcg 121 gggccccagc cccggccccc tctctccctc ccttctctct aattcccctt ccggacgctg 181 ccatcatgtt gaagcctcag ccgctacaac agccctccca gccccagcag ccgcctcccc 241 ctgcctgggg cctgtggccg ctgccgggag cgggctccgc cggggagccg aaggcatctt 301 ggcgccgcag ccgccgccgc cgcagcaaca ccaggagagg ccgggggcag ccgccatcgg 361 cagcgccagg ggacagagca caggaaaggg acccccacag tcacctgtgt ttgaaggcgt 421 ctacaacaat tccagaatgc tgcatttcct tacagctgtt gtgggctcca cttgtgatgt 481 aaaggtgaaa aatggtacca cttatgaggg tatcttcaag acgctaagct caaagtttga 541 actagccgtg gatgctgtgc accggaaagc atctgagcca gcaggtggcc ctcgtcggga 601 ggacattgtg gacaccatgg tgtttaagcc aagtgatgtc atgcttgttc acttccgaaa 661 tgttgacttc aactatgcta ctaaagacaa gttcaccgat tcagccattg ccatgaactc 721 gaaagtgaat ggggaacaca aagagaaggt gcttcagcgc tgggaggggg gtgacagcaa 781 cagcgacgac tatgacctcg agtctgacat gtccaatgga tgggacccca atgaaatgtt 841 caagttcaat gaggagaact acggtgtgaa gactacctat gatagcagtc tttcttctta 901 tacggtgccc ttagaaaagg acaactcaga agagtttcgt cagcgagagc tgcgtgcggc 961 ccagttggct cgagagattg aatcaagccc ccagtaccgc ctacggatcg ccatggagaa 1021 cgacgatggg cgcactgaag aggagaagca cagtgcagtc cagcggcagg gctcagggcg 1081 ggagagcccc agcttggcat ccagggaggg gaagtatatc cctctgcctc aacgagtccg 1141 ggaaggtccc cggggaggag ttcgatgcag cagctctcgg ggcggtcggc ctggccttag 1201 ctctttgcca cctcgtggcc ctcaccatct ggacaacagc agccctggcc caggttctga 1261 ggcccgtggt atcaatggag gcccttcccg catgtcccca aaggcacagc ggcctctgag 1321 aggtgccaag actctgtctt cgcccagtaa taggccttct ggagaaactt ctgttccacc 1381 tcctcctgca gtgggccgga tgtatccccc gcgttctccc aagtctgctg cccctgcccc 1441 aatctcagct tcctgtccag agcctcccat cggctcggca gtgccaacct cttcagcctc 1501 catccctgtg acctcatcag tctcagatcc tggagtgggc tccatttctc cagcttctcc 1561 aaagatctcc ctggccccca cagatgtaaa agaactctct accaaggaac ctgggagaac 1621 tctggagccc caggagctgg ctcggatagc tgggaaagtc cctggtcttc agaatgaaca 1681 gaaacgattc caactggaag aactgagaaa gtttggggcc cagtttaagc ttcagcccag 1741 tagctcccct gagaacagcc tggatccttt tcctccccgg atcttaaagg aggagcccaa 1801 aggaaaggag aaagaggttg atggtctgtt gacttcagag cccatggggt ctcccgtctc 1861 ctccaagaca gagtccgtat cggataagga ggacaaacca cccctggcac catcaggagg 1921 cactgagggg ccagagcagc ccccaccacc ttgtccaagc caaactggca gccccccggt 1981 gggcctcatc aagggagaag acaaagatga gggccctgtt gctgaacaag taaagaaatc 2041 aacgttgaac cctaatgcta aggagttcaa tcctacaaag cctctgctgt ctgtgaataa 2101 atccaccagt accccaactt ctccggggcc ccggactcat tcaactccct ccatcccggt 2161 gctgacagca ggccagagtg ggctatacag cccccagtac atctcctaca tacctcagat 2221 ccacatggga ccagctgtgc aggcacctca gatgtatcca tatcctgtat ccaattcagt 2281 gcctgggcag cagggcaagt accggggagc aaaaggctcc cttcctccgc agcgctcgga 2341 ccaacaccag ccagcctcag ccccgccgat gatgcaggcc gccgcggctg ctggcccgcc 2401 tctggtggct gccacgccct attcttccta catcccctac aaccctcagc agttcccagg 2461 ccagccagcc atgatgcagc ccatggccca ctacccctca cagccggtgt ttgcccccat 2521 gcttcagagc aacccacgca tgctgacgtc gggcagccat ccccaggcca tcgtgtcatc 2581 ctctacccct cagtaccctt ctgcagagca gcctaccccc caagcccttt atgccactgt 2641 tcaccagtcc tacccacacc atgccacaca gctccatgcc caccagccgc agccggctac 2701 cacgcctact ggaagccagc cgcagtccca gcatgcggcc cccagtcctg tccagcatca 2761 ggcggggcag gccccacact tgggcagtgg acagccacag cagaatctgt accacccagg 2821 ggccctgaca ggcacgccgc cctctctgcc accgggacct tctgcccagt cccctcagag 2881 cagcttcccc cagccagccg ctgtgtatgc catccaccac cagcagctgc cccacggctt 2941 caccaacatg gcccatgtta cccaggccca tgtccaaact ggaatcacag cagccccgcc 3001 ccctcaccct ggggctcccc acccgcccca ggtgatgctg ctgcacccac cccagagtca 3061 tggggggccc ccccaaggcg cggtgcccca gagtggggtg cctgcactct cagcttccac 3121 accctcaccc tacccctaca tcggacaccc ccaaggtgag cagcctggcc aggcgcctgg 3181 atttccagga ggagccgatg acaggattcg tgagttctca ttagctgggg gaatttggca 3241 tggaagagct gaggggctgc aggtggggca ggatgcacgg gttctgggtg gggagtgagg 3301 ggtcttggag gcagggctgt cccacagggc gcccgccgac ctgcacctgt ctgtgaagta 3361 tgtagggtgg gcagaagcca cagtcgccgc cgccaggggc ttgctcctgg ctctgtcctt 3421 tgcttccctc cgtcctcgct cagttgtgat ccagcagccc ccctccccac tgcctcccca 3481 gctctcagtg accccgactg tctcctgact tagccgaggt aaggtcagtg cagcagacag 3541 ggccagactg gggtgtgggg ggctgagctg ggcacatgag tgagggctct ggcttactgg 3601 gaaacagcga ttgacctgtg cttctgacag cccccgagac accttgagga ggccgctcct 3661 tcccagacac acccccacgc ccccactgga cggcattgga ggaagggaca gctgcttggg 3721 ttctaatgct cctgctctct tctctttccc ctccaaccag ttcaatctca tccctcccag 3781 cagctcccct tccacccccc ggggaactga agattgtcct ggccgcgacc tgagacctcc 3841 atgagtggag ggaagagtga tctatgtctc ttcccccagc agctcggacc actcccagcc 3901 ccccatcccc ccgttcccca ggggagctgg ggaattcctg ccaagcacct tgaatgggag 3961 gggcctcaca gagggcaggg ccagggtcca gcaggggtgg ggggttcctg ctctgcccct 4021 gcccgtcccc acccagtctt gccctcccat cctctcatct attcccccgc tggagacgga 4081 agatctttta ttttctatta tttataactt cagacttggg ccccctgttc tttctttccc 4141 attaacttga gtgacctgtg tgagagacag acagatgccc cacgaggatg gctggacaag 4201 gacttttact ttttattaca taaaaatatt aaaaaataaa taaaaaaaat aaaattttaa 4261 actaacttaa aaaaaaaaaa aaa //