LOCUS BC068004 750 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens selenoprotein M, mRNA (cDNA clone MGC:70626
IMAGE:6058758), complete cds.
ACCESSION BC068004
VERSION BC068004.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 750)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 750)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: e Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46370092.
FEATURES Location/Qualifiers
source 1..750
/db_xref="H-InvDB:HIT000262879"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70626 IMAGE:6058758"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..750
/gene="SELM"
/gene_synonym="MGC40146"
/gene_synonym="SEPM"
/db_xref="GeneID:140606"
CDS 51..488
/gene="SELM"
/gene_synonym="MGC40146"
/gene_synonym="SEPM"
/codon_start=1
/transl_except=(pos:192..194,aa:Sec)
/product="selenoprotein M"
/protein_id="AAH68004.1"
/db_xref="GeneID:140606"
/translation="MSLLLPPLALLLLLAALVAPATAATAYRPDWNRLSGLTRARVET
CGGUQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELERIPLSEMTR
EEINALVQELGFYRKAAPDAQVPPEYVWAPAKPPEETSDHADL"
BASE COUNT 190 a 234 c 205 g 121 t
ORIGIN
1 cgactcggag gttcgcctcc agcttgcgca tcatctgcgg ccgggtcccg atgagcctcc
61 tgttgcctcc gctggcgctg ctgctgcttc tcgcggcgct tgtggcccca gccacagccg
121 ccactgccta ccggccggac tggaaccgtc tgagcggcct aacccgcgcc cgggtagaga
181 cctgcggggg atgacagctg aaccgcctaa aggaggtgaa ggctttcgtc acgcaggaca
241 ttccattcta tcacaacctg gtgatgaaac acctccctgg ggccgaccct gagctcgtgc
301 tgctgggccg ccgctacgag gaactagagc gcatcccact cagtgaaatg acccgcgaag
361 agatcaatgc gctagtgcag gagctcggct tctaccgcaa ggcggcgccc gacgcgcagg
421 tgccccccga gtacgtgtgg gcgcccgcga agcccccaga ggaaacttcg gaccacgctg
481 acctgtaggt ccgggggcgc ggcggagctg ggacctacct gcctgagtcc tggagacaga
541 atgaagcgct cagcatcccg ggaatacttc tcttgctgag agccgatgcc cgtccccggg
601 ccagcaggga tggggttggg gaggttctcc caaccccact ttcttccttc cccagctcca
661 ctaaattccc tcctgcctta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
721 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//