LOCUS BC067798 2165 bp mRNA linear HUM 26-JUN-2007 DEFINITION Homo sapiens spastic paraplegia 11 (autosomal recessive), mRNA (cDNA clone IMAGE:5270747), partial cds. ACCESSION BC067798 VERSION BC067798.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2165) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2165) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: n Column: 6. FEATURES Location/Qualifiers source 1..2165 /db_xref="H-InvDB:HIT000262766" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5270747" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene <1..2165 /gene="SPG11" /db_xref="GeneID:80208" /db_xref="HGNC:HGNC:11226" /db_xref="MIM:610844" CDS <1..1725 /gene="SPG11" /codon_start=1 /product="SPG11 protein" /protein_id="AAH67798.1" /db_xref="GeneID:80208" /db_xref="HGNC:HGNC:11226" /db_xref="MIM:610844" /translation="LDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLH CRALASGEASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSN EVVTNLEVLTSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLRKILASQQP DRCKRAQAFISTQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLT TLCQDRTLVGMKLLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHML TDNHLAPSEEYGLVVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTAL LDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQL KQLLLKALTLMLDAAESYAKDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRH KLMDCILALPRFYQASIVAEAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSI FEEISKKYKQHQPTDMVMENLKKLLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGC CLKDMLAG" BASE COUNT 625 a 472 c 507 g 561 t ORIGIN 1 ttggattgga aagagcagga gtcactaaac tttttgattg ggcgcctact ggatgatggc 61 tgtgtgcatg aagcaagtag agtatgccgg tattttcatt tttataatcc agatgtcgcc 121 ttggtattgc actgcagagc actggcctca ggggaagcta gtatggagga tctgcaccca 181 gagatccatg ctctcctaca aagtgctgag ctgcttgagg aagaagcacc cgacattccc 241 ctaaggagag tccacagcac ttcaagtctg gatagtcaga agtttgtgac agtgccctcc 301 agtaatgaag tggtaactaa cctggaagtg ctgacaagca aatgcctcca tgggaagaac 361 tactgtcgac aggtcctctg tctgtatgat cttgccaagg agttgggctg ttcctacaca 421 gatgttgctg ctcaggatgg tgaagccatg ctccggaaaa tcttggcctc tcagcagcct 481 gaccgatgca aacgagccca ggccttcatc agcacacagg gccttaagcc agatactgtg 541 gctgaactcg tggcagaaga ggtgacacgg gagctgctta cttcatcaca gggaacagga 601 cataagcaga tgttcaaccc aacagaggaa agccagacat ttcttcagct gaccactctg 661 tgtcaagacc gcacattggt aggcatgaag ttgttggata agatttcctc cgttccccat 721 ggggaactgt cttgcaccac agagctcctg atcctggccc atcattgctt caccctgacg 781 tgccacatgg agggcatcat ccgagtccta caggccgccc acatgctcac agataaccac 841 ctggccccca gtgaggagta tgggctggtg gtacggctcc tcactggcat tggaaggtac 901 aacgagatga catacatatt tgatttgctg cataaaaagc actactttga agtgctaatg 961 aggaagaagt tggatccgag tggtaccctg aaaacagccc tgctggacta catcaaacgc 1021 tgccgtcctg gagacagtga aaagcacaat atgattgccc tgtgcttcag catgtgccgg 1081 gagattggcg agaaccacga ggcagctgcc cgcatccaac tgaaattgat tgagtctcag 1141 ccctgggagg acagcctcaa ggatgggcac cagctgaaac aactgctgct gaaggccctg 1201 actctgatgt tggatgcagc agagagttat gccaaggact cctgtgtgcg acaggcccag 1261 cactgtcagc ggctcaccaa gttgataact ctgcagattc actttctgaa cactggccag 1321 aacacaatgc tcatcaactt gggccgccac aagctgatgg actgtattct ggccctacct 1381 cggttctacc aggcttctat tgtggctgag gcctacgatt ttgttccaga ttgggctgaa 1441 attttatacc agcaagtgat tcttaaagga gactttaatt acttggaaga atttaagcag 1501 caaaggttat taaagtccag tatatttgaa gagatttcca aaaaatataa acaacatcag 1561 cctactgaca tggtcatgga aaacctgaag aaattactca catattgtga agatgtttac 1621 ctgtattaca agttggcata cgaacacaag ttttatgaaa ttgtaaatgt gcttctgaag 1681 gaccctcaga caggttgctg tctaaaggac atgctagcag gttagatgat ttcataggtg 1741 tctgttttct tgtactgtta gcagattctg acagatgtga tgagaagaag aatgcattgg 1801 agatctttgc taaagttgaa caatcccggt actgtaccaa atcagtcctt tgtgggtagt 1861 aggtagcaag taagaaactt ttcaggagga aattcctatt taaaatagat tgattttaga 1921 tgattgttca tccacaccat tttatataga tactagtatt aagatcaaaa gcttcctctt 1981 cctcaggaca gcttctactt tagatgatcc aataatgatt aaagaatacc tgtacatgca 2041 gattccagtt tcaaagaaat ttaattatta tttacacagt taaggaacag gtgatacatt 2101 ttcatttgtt agaaactgat ctttctgtaa taaaatagat tttcaattca aaaaaaaaaa 2161 aaaaa //