LOCUS       BC067798                2165 bp    mRNA    linear   HUM 26-JUN-2007
DEFINITION  Homo sapiens spastic paraplegia 11 (autosomal recessive), mRNA
            (cDNA clone IMAGE:5270747), partial cds.
ACCESSION   BC067798
VERSION     BC067798.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2165)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 167 Row: n Column: 6.
FEATURES             Location/Qualifiers
     source          1..2165
                     /db_xref="H-InvDB:HIT000262766"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5270747"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            <1..2165
                     /gene="SPG11"
                     /db_xref="GeneID:80208"
                     /db_xref="HGNC:HGNC:11226"
                     /db_xref="MIM:610844"
     CDS             <1..1725
                     /gene="SPG11"
                     /codon_start=1
                     /product="SPG11 protein"
                     /protein_id="AAH67798.1"
                     /db_xref="GeneID:80208"
                     /db_xref="HGNC:HGNC:11226"
                     /db_xref="MIM:610844"
                     /translation="LDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNPDVALVLH
                     CRALASGEASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSN
                     EVVTNLEVLTSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLRKILASQQP
                     DRCKRAQAFISTQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLT
                     TLCQDRTLVGMKLLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAHML
                     TDNHLAPSEEYGLVVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTAL
                     LDYIKRCRPGDSEKHNMIALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQL
                     KQLLLKALTLMLDAAESYAKDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLGRH
                     KLMDCILALPRFYQASIVAEAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSI
                     FEEISKKYKQHQPTDMVMENLKKLLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGC
                     CLKDMLAG"
BASE COUNT          625 a          472 c          507 g          561 t
ORIGIN      
        1 ttggattgga aagagcagga gtcactaaac tttttgattg ggcgcctact ggatgatggc
       61 tgtgtgcatg aagcaagtag agtatgccgg tattttcatt tttataatcc agatgtcgcc
      121 ttggtattgc actgcagagc actggcctca ggggaagcta gtatggagga tctgcaccca
      181 gagatccatg ctctcctaca aagtgctgag ctgcttgagg aagaagcacc cgacattccc
      241 ctaaggagag tccacagcac ttcaagtctg gatagtcaga agtttgtgac agtgccctcc
      301 agtaatgaag tggtaactaa cctggaagtg ctgacaagca aatgcctcca tgggaagaac
      361 tactgtcgac aggtcctctg tctgtatgat cttgccaagg agttgggctg ttcctacaca
      421 gatgttgctg ctcaggatgg tgaagccatg ctccggaaaa tcttggcctc tcagcagcct
      481 gaccgatgca aacgagccca ggccttcatc agcacacagg gccttaagcc agatactgtg
      541 gctgaactcg tggcagaaga ggtgacacgg gagctgctta cttcatcaca gggaacagga
      601 cataagcaga tgttcaaccc aacagaggaa agccagacat ttcttcagct gaccactctg
      661 tgtcaagacc gcacattggt aggcatgaag ttgttggata agatttcctc cgttccccat
      721 ggggaactgt cttgcaccac agagctcctg atcctggccc atcattgctt caccctgacg
      781 tgccacatgg agggcatcat ccgagtccta caggccgccc acatgctcac agataaccac
      841 ctggccccca gtgaggagta tgggctggtg gtacggctcc tcactggcat tggaaggtac
      901 aacgagatga catacatatt tgatttgctg cataaaaagc actactttga agtgctaatg
      961 aggaagaagt tggatccgag tggtaccctg aaaacagccc tgctggacta catcaaacgc
     1021 tgccgtcctg gagacagtga aaagcacaat atgattgccc tgtgcttcag catgtgccgg
     1081 gagattggcg agaaccacga ggcagctgcc cgcatccaac tgaaattgat tgagtctcag
     1141 ccctgggagg acagcctcaa ggatgggcac cagctgaaac aactgctgct gaaggccctg
     1201 actctgatgt tggatgcagc agagagttat gccaaggact cctgtgtgcg acaggcccag
     1261 cactgtcagc ggctcaccaa gttgataact ctgcagattc actttctgaa cactggccag
     1321 aacacaatgc tcatcaactt gggccgccac aagctgatgg actgtattct ggccctacct
     1381 cggttctacc aggcttctat tgtggctgag gcctacgatt ttgttccaga ttgggctgaa
     1441 attttatacc agcaagtgat tcttaaagga gactttaatt acttggaaga atttaagcag
     1501 caaaggttat taaagtccag tatatttgaa gagatttcca aaaaatataa acaacatcag
     1561 cctactgaca tggtcatgga aaacctgaag aaattactca catattgtga agatgtttac
     1621 ctgtattaca agttggcata cgaacacaag ttttatgaaa ttgtaaatgt gcttctgaag
     1681 gaccctcaga caggttgctg tctaaaggac atgctagcag gttagatgat ttcataggtg
     1741 tctgttttct tgtactgtta gcagattctg acagatgtga tgagaagaag aatgcattgg
     1801 agatctttgc taaagttgaa caatcccggt actgtaccaa atcagtcctt tgtgggtagt
     1861 aggtagcaag taagaaactt ttcaggagga aattcctatt taaaatagat tgattttaga
     1921 tgattgttca tccacaccat tttatataga tactagtatt aagatcaaaa gcttcctctt
     1981 cctcaggaca gcttctactt tagatgatcc aataatgatt aaagaatacc tgtacatgca
     2041 gattccagtt tcaaagaaat ttaattatta tttacacagt taaggaacag gtgatacatt
     2101 ttcatttgtt agaaactgat ctttctgtaa taaaatagat tttcaattca aaaaaaaaaa
     2161 aaaaa
//