LOCUS BC067779 2052 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens TRAF family member-associated NFKB activator, mRNA (cDNA clone MGC:87157 IMAGE:5296558), complete cds. ACCESSION BC067779 VERSION BC067779.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2052) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2052) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: d Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19743568. FEATURES Location/Qualifiers source 1..2052 /db_xref="H-InvDB:HIT000262747" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87157 IMAGE:5296558" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2052 /gene="TANK" /gene_synonym="I-TRAF" /db_xref="GeneID:10010" /db_xref="MIM:603893" CDS 101..1378 /gene="TANK" /gene_synonym="I-TRAF" /codon_start=1 /product="TANK protein" /protein_id="AAH67779.1" /db_xref="GeneID:10010" /db_xref="MIM:603893" /translation="MDKNIGEQLNKAYEAFRQACMDRDSAVKELQQKTENYEQRIREQ QEQLSLQQTIIDKLKSQLLLVNSTQDNNYGCVPLLEDSETRKNNLTLDQPQDKVISGI AREKLPKVRRQEVSSPRKETSARSLGSPLLHERGNIEKTFWDLKEEFHKICMLAKAQK DHLSKLNIPDTATETQCSVPIQCTDKTDKQEALFKPQAKDDINRGAPSITSVTPRGLC RDEEDTSFESLSKFNVKFPPMDNDSTFLHSTPERPGILSPATSEVVCQEKFNMEFRDN PGNFVKTEETLFEIQGIDPIASAIQNLKTTDKTKPSNLVNTCIRTTLDRAACLPPGDH NALYVNSFPLLDPSDAPFPSLDSPGKAIRGPQQPIWKPFPNQDSDSVVLSGTDSELHI PRVCEFCQAVFPPSITSRGDFLRHLNSHFNGET" BASE COUNT 723 a 372 c 370 g 587 t ORIGIN 1 aggcgccggc gacctgaggg gagagggaac gcagctgaaa gcgtgaactg tacctgtcat 61 ttactccatc ctttatagtg atgctacagg acgaagagga atggataaaa acattggcga 121 gcaactcaat aaagcgtatg aagccttccg gcaggcatgc atggatagag attctgcagt 181 aaaagaatta cagcaaaaga ctgagaacta tgagcagaga atacgtgaac aacaggaaca 241 gctgtcactt caacagacta ttattgacaa gctaaaatct cagttacttc ttgtgaattc 301 cactcaagat aacaattatg gctgtgttcc tctgcttgaa gacagtgaaa caagaaagaa 361 taatttgact cttgatcagc cacaagataa agtgatttca ggaatagcaa gagaaaaact 421 accaaaggta agaagacaag aggtttcttc tcctagaaaa gaaacttcag caaggagtct 481 tggcagtcct ttgctccatg aaaggggtaa tatagagaag actttctggg atctgaaaga 541 agaatttcat aaaatatgca tgctagcaaa agcacagaaa gaccacttaa gcaaacttaa 601 tataccagac actgcaactg aaacacagtg ctctgtgcct atacagtgta cggataaaac 661 agataaacaa gaagcgctgt ttaagcctca ggctaaagat gatataaata gaggtgcacc 721 atccatcaca tctgtcacac caagaggact gtgcagagat gaggaagaca cctcttttga 781 atcactttct aaattcaatg tcaagtttcc acctatggac aatgactcaa ctttcttaca 841 tagcactcca gagagacccg gcatccttag tcctgccacg tctgaggtag tgtgccaaga 901 gaaatttaat atggagttca gagacaaccc agggaacttt gttaaaacag aagaaacttt 961 atttgaaatt cagggaattg accccatagc ttcagctata caaaacctta aaacaactga 1021 caaaacaaag ccctcaaatc tcgtaaacac ttgtatcagg acaactctgg atagagctgc 1081 gtgtttgcca cctggagacc ataatgcatt atatgtaaat agcttcccac ttctggaccc 1141 atctgatgca ccttttccct cactcgattc cccgggaaaa gcaatccgag gaccacagca 1201 gcccatttgg aagccctttc ctaatcaaga cagtgactcg gtggtactaa gtggcacaga 1261 ctcagaactg catatacctc gagtatgtga attctgtcaa gcagttttcc caccatccat 1321 tacatccagg ggggatttcc ttcggcatct taattcacac ttcaatggag agacttaaga 1381 cacatttgaa aacagacata tcaagttcta tgtgatgatt ttgggttttt aatactataa 1441 atacttgatt gtaaactaaa ttcaagatca tttataggaa aatctagttt cacagctatt 1501 tgaatttttt tctggattta ctatataact cttatttttt aaaagatcat tctgttcttt 1561 caaggagaaa taagcctaaa agaagaaaaa caaaaaaaat tctgtataaa actgtaatcc 1621 tttgtattca tgtttacagt gctattacta taattcaaaa ttatgtatgt gacttagagt 1681 tatataatca taatttatgt ttatttcaaa tatctaagtt tattgcttgg atttctagtg 1741 agagctgttg aatttggtga tgtcaaatgt ttctagggtt tttttagttt gtttttattg 1801 aaaaatttaa ttatttatgc tataggtgat attctctttg aataaaccta taatagaaaa 1861 tagcagacaa cataaacatc tttgtaaata tcaaacctaa tacatttctt gtccagtgat 1921 aaaacaactg gtagaattat ttaaacactt tagattttta aataatatac atggctttaa 1981 tttttactgt gtgtatagct acatgatgaa attaattaaa tattaagagg taaaaataaa 2041 aaaaaaaaaa aa //