LOCUS BC064997 2795 bp mRNA linear HUM 03-MAY-2019
DEFINITION Homo sapiens NCK-associated protein 1-like, mRNA (cDNA clone
IMAGE:5786841), partial cds.
ACCESSION BC064997
VERSION BC064997.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2795)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2795)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 2795)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2019) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On May 3, 2019 this sequence version replaced BC064997.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: p Column: 2.
FEATURES Location/Qualifiers
source 1..2795
/db_xref="H-InvDB:HIT000261702"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5786841"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2795
/gene="NCKAP1L"
/db_xref="GeneID:3071"
/db_xref="HGNC:HGNC:4862"
/db_xref="IMGT/GENE-DB:4862"
/db_xref="MIM:141180"
CDS <1..2497
/gene="NCKAP1L"
/codon_start=2
/product="NCKAP1L protein"
/protein_id="AAH64997.2"
/db_xref="GeneID:3071"
/db_xref="HGNC:HGNC:4862"
/db_xref="IMGT/GENE-DB:4862"
/db_xref="MIM:141180"
/translation="DVLQVHKVTEDLFSSLKGYGKRVADIKESKEHVIANSGQFHCQR
RQFLRMAVKELETVLADEPGLLGPKALFAFMALSFIRDEVTWLVRHTENVTKTKTPED
YADSSIAELLFLLEGIRSLVRRHIKVIQQYHLQYLARFDALVLSDIIQNLSVCPEEES
IIMSSFVSILSSLNLKQVDNGEKFEFSGLRLDWFRLQAYTSVAKAPLHLHENPDLAKV
MNLIVFHSRMLDSVEKLLVETSDLSTFCFHLRIFEKMFAMTLEESAMLRYAIAFPLIC
AHFVHCTHEMCPEEYPHLKNHGLHHCNSFLEELAKQTSNCVLEICAEQRNLSEQLLPK
HCATTISKAKNKKTRKQRQTPRKGEPERDKPGAESHRKNRSIVTNMDKLHLNLTELAL
TMNHVYSFSVFEHTIFPSEYLSSHLEARLNRAIVWLAGYNATTQEIVRPSELLAGVKA
YIGFIQSLAQFLGADASRVIRNALLQQTQPLDSCGEQTITTLYTNWYLESLLRQASSG
TIILSPAMQAFVSLPREGEQNFSAEEFSDISEMRALAELLGPYGMKFLSENLMWHVTS
QIVELKKLVVENMDILVQIRSNFSKPDLMASLLPQLTGAENVLKRMTIIGVILSFRAM
AQEGLREVFSSHCPFLMGPIECLKEFVTPDTDIKVTLSIFELASAAGVGCDIDPALVA
AIANLKADTSSPEEEYKVACLLLIFLAVSLPLLATDPSSFYSIEKDGYNNNIHCLTKA
IIQVSAALFTLYNKNIETHLKEFLVVASVSLLQLGQETDKLKTRNRESISLLMRLVVE
ESSFLTLDMLESCFPYVLLRNAYREVSRAFHLN"
BASE COUNT 709 a 695 c 715 g 676 t
ORIGIN
1 ggatgtgctg caggtgcaca aagtcaccga ggacctgttt agcagtttga aagggtatgg
61 caagagagtg gcagacataa aggagagcaa ggaacatgta attgcaaaca gtggccagtt
121 tcattgtcaa cggcggcaat ttctgcggat ggcagtgaag gagctggaga ctgtgttggc
181 tgatgaaccg ggactactgg gtcctaaggc tctttttgct ttcatggccc tgtccttcat
241 tcgtgatgag gtcacctggc tggttcgcca cacagagaat gtcaccaaga caaagacacc
301 tgaggactat gctgactcga gcattgcaga gctacttttc ttgttggagg ggattaggtc
361 tctggtccga agacacatca aagtgataca gcaataccac cttcagtact tggcaagatt
421 tgatgctctt gtgctcagtg acatcattca gaacttgtct gtgtgtccag aggaggagtc
481 catcatcatg tcctcattcg tcagtatcct ctcctctctg aatctcaaac aagttgataa
541 tggagaaaaa tttgaattct caggattgag gctggactgg ttccgcctac aggcatacac
601 tagcgtggct aaggcccctc tgcacctgca tgagaaccct gacttagcca aggtgatgaa
661 cctcattgtc ttccactccc gaatgctgga ctccgtagaa aaattgctgg tggaaacttc
721 tgatctgtct actttctgct ttcatcttcg tatctttgag aagatgtttg ccatgacctt
781 ggaggaatct gccatgttgc gttatgccat tgctttcccc ctgatttgtg ctcactttgt
841 ccactgcact catgagatgt gcccagagga gtacccccac ctcaagaacc atggtcttca
901 ccactgcaac tccttcctgg aagagttggc caagcagacc agcaattgcg tcctggagat
961 ctgtgctgag cagcgaaacc tgagcgagca gcttctacct aagcactgtg ccactacaat
1021 cagcaaagcc aagaacaaga aaaccaggaa gcagaggcag actcccagaa aaggagagcc
1081 cgagagggac aagccaggag ctgagagtca ccggaagaac cgcagcattg tcaccaacat
1141 ggacaagcta cacctaaact tgacagaact ggcactgaca atgaatcatg tatacagttt
1201 ctccgtgttt gaacatacta tcttcccttc tgagtacctc agcagccacc tggaggccag
1261 actcaacaga gccattgtgt ggctggctgg ctacaatgcc acgacccagg agatcgtacg
1321 gccttctgag ctgttggcag gagtcaaagc atacattggt ttcatacagt cactggccca
1381 gtttttgggt gcagatgctt ccagagtcat ccgcaacgcc ctcctgcagc agacacaacc
1441 actggattcc tgtggggaac agacaatcac cacactctac acaaactggt acctggaaag
1501 tctgcttaga caggcaagca gtgggaccat catcctctcc ccagccatgc aggccttcgt
1561 cagcctgccc agagaagggg agcagaactt cagtgcagag gagttctctg acatctctga
1621 gatgcgggcc ttggcagaac tcctgggccc ctatggcatg aagttcctga gtgaaaacct
1681 gatgtggcat gtgacctctc agattgtgga gctgaagaag ctggtggtgg aaaacatgga
1741 catacttgtt cagatcagat ccaactttag caagccggac ttgatggctt ccctgctgcc
1801 ccagctgaca ggggctgaaa atgtgctaaa gcgcatgacc atcattgggg ttatcctcag
1861 tttcagggcc atggcccaag agggacttcg ggaggttttc tcctcccact gcccatttct
1921 tatgggtccc attgagtgct tgaaggagtt tgtcactcca gacacagaca tcaaggtgac
1981 cttgagtatc tttgagctgg catctgctgc aggtgtgggc tgtgacattg acccagcctt
2041 ggtggctgcc attgctaatc tgaaagctga tacttcatct cctgaggagg aatataaggt
2101 ggcctgcctg ctcttgatct ttctggcagt ttccctccca ctccttgcca ctgacccttc
2161 ttccttttat agcattgaga aggatggtta caacaacaat attcattgct tgaccaaagc
2221 catcatccag gtgtctgctg ccctcttcac gctctacaac aagaacattg aaactcacct
2281 caaggaattt ctggtggtgg cctctgtcag cctcttgcag ctgggccagg agactgacaa
2341 gcttaaaacc agaaatcgag aatccatttc tctgctcatg cgcttggtgg tggaggagtc
2401 atccttcctg accctggaca tgctggagtc ctgtttccct tatgtcctgc ttcgaaatgc
2461 ctatcgggag gtgtctcggg ccttccacct aaactgaatg cctgccagta cccactgaag
2521 agccctttgg accttcctaa acccttgcca tagtggaagc tgtggtcact ttcgcagggg
2581 gtgggaatgg ggtggggtca ctaaggagag agggtcagga gccagagttg atgagcagat
2641 ctgtggaaga acaatccagg gctgagaaat cgtagagcag tgaggcaggc tgggagcatg
2701 gaggacagct tatggaaaaa gttagggcgt ggggccacat gtgtgaattt tacaatgaaa
2761 aaaggagtaa cgtacaagta aaaaaaaaaa aaaaa
//