LOCUS BC064806 1638 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens natural cytotoxicity triggering receptor 1, mRNA (cDNA
clone MGC:65100 IMAGE:5218848), complete cds.
ACCESSION BC064806
VERSION BC064806.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27545441.
FEATURES Location/Qualifiers
source 1..1638
/db_xref="H-InvDB:HIT000261583"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65100 IMAGE:5218848"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1638
/gene="NCR1"
/gene_synonym="CD335"
/gene_synonym="NK-p46"
/gene_synonym="NKP46"
/db_xref="GeneID:9437"
/db_xref="HGNC:HGNC:6731"
/db_xref="MIM:604530"
CDS 26..937
/gene="NCR1"
/gene_synonym="CD335"
/gene_synonym="NK-p46"
/gene_synonym="NKP46"
/codon_start=1
/product="natural cytotoxicity triggering receptor 1"
/protein_id="AAH64806.1"
/db_xref="GeneID:9437"
/db_xref="HGNC:HGNC:6731"
/db_xref="MIM:604530"
/translation="MSSTLPALLCVGLCLSQRISAQQQTLPKPFIWAEPHFMVPKEKQ
VTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV
GELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGR
SSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDIENTS
LAPEDPTFPDTWGTYLLTTETGLQKDHALWDHTAQNLLRMGLAFLVLVALVWFLVEDW
LSRKRTRERASRASTWEGRRRLNTQTL"
BASE COUNT 431 a 417 c 424 g 366 t
ORIGIN
1 gcactaggcc ggcagaatct gagcgatgtc ttccacactc cctgccctgc tctgcgtcgg
61 gctgtgtctg agtcagagga tcagcgccca gcagcagact ctcccaaaac cgttcatctg
121 ggccgagccc catttcatgg ttccaaagga aaagcaagtg accatctgtt gccagggaaa
181 ttatggggct gttgaatacc agctgcactt tgaaggaagc ctttttgccg tggacagacc
241 aaaaccccct gagcggatta acaaagtcaa attctacatc ccggacatga actcccgcat
301 ggcagggcaa tacagctgca tctatcgggt tggggagctc tggtcagagc ccagcaactt
361 gctggatctg gtggtaacag aaatgtatga cacacccacc ctctcggttc atcctggacc
421 cgaagtgatc tcgggagaga aggtgacctt ctactgccgt ctagacactg caacaagcat
481 gttcttactg ctcaaggagg gaagatccag ccacgtacag cgcggatacg ggaaggtcca
541 ggcggagttc cccctgggcc ctgtgaccac agcccaccga gggacatacc gatgttttgg
601 ctcctataac aaccatgcct ggtctttccc cagtgagcca gtgaagctcc tggtcacagg
661 cgacattgag aacaccagcc ttgcacctga agaccccacc tttcctgaca cttggggcac
721 ctacctttta accacagaga cgggactcca gaaagaccat gccctctggg atcacactgc
781 ccagaatctc cttcggatgg gcctggcctt tctagtcctg gtggctctag tgtggttcct
841 ggttgaagac tggctcagca ggaagaggac tagagagcga gccagcagag cttccacttg
901 ggaaggcagg agaaggctga acacacagac tctttgaaga atgaccatga gacacagtgg
961 ccatgggtgg atctgaaagc tggtgttgag cctgggcggc gtgagctctg tgttggaccc
1021 acggaggagg gagtcactgc agggaaagag ggacactggc attccatttg tcagagcatc
1081 ccggacgatg cagagggtgg gagaactaca tgctaaattt cttttttttt ttttgagacg
1141 gagttttctc ttgttgccca ggctggagtg cagtggcgcg atcttggctc actgcaacct
1201 ctagctctcc atccctcggg agaatcgctt gaacctggga ggcggaggtt gcggtgagcc
1261 ggggtcgtgc cgctgcgctc cagcctgggc gacggagcga gactccgtct caaaaaaaaa
1321 aaaaaaaaaa aaaaccacat aggctcagtc ttttcagtat ctgctttact ggttcagtaa
1381 aagccaggaa acacaacttt gtggtaatct gaatgttatt gaactgtatt ttgttcactt
1441 tattgtaaat actggtgaac agtgaataaa tggttgtata ttcctaataa gaaaaaaaaa
1501 aaaaaagacc caaagtacag caagctgatg ccgatctcat ttcgcagagg tccgcctgct
1561 ctcccctctc caagagtgta atcctctgct taataaactt atgccgcttt gctaaaaaaa
1621 aaaaaaaaaa aaaaaaaa
//