LOCUS BC064585 1625 bp mRNA linear HUM 09-AUG-2007
DEFINITION Homo sapiens general transcription factor IIA, 1-like, mRNA (cDNA
clone IMAGE:5742182), partial cds.
ACCESSION BC064585
VERSION BC064585.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: j Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26787967.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000261504"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5742182"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1625
/gene="GTF2A1L"
/gene_synonym="ALF"
/db_xref="GeneID:11036"
/db_xref="HGNC:HGNC:30727"
/db_xref="MIM:605358"
CDS <1..1436
/gene="GTF2A1L"
/gene_synonym="ALF"
/codon_start=3
/product="GTF2A1L protein"
/protein_id="AAH64585.1"
/db_xref="GeneID:11036"
/db_xref="HGNC:HGNC:30727"
/db_xref="MIM:605358"
/translation="ACLNPVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKQLWET
KVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLPSFTTAELGT
SNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGILQHPIQQVFQQ
LGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHLENATSDILV
SPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSDVESVLSGSASMAQNLHDE
SLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEKDSNSQVDLS
IRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVPEEEADSISN
EDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKW
KFYLKDGVMCFGGRDYVFAKAIGDAEW"
BASE COUNT 535 a 302 c 336 g 452 t
ORIGIN
1 tggcctgcct caacccggtg cctaaactct acagatctgt aattgaagat gtaattgaag
61 gagttcggaa tctatttgct gaagaaggta tagaggaaca agttttaaaa gacttgaagc
121 agctctggga aaccaaggtt ttgcagtcta aagcaacaga agacttcttc agaaatagca
181 tccaatcacc tctgtttact cttcagttgc cgcacagctt gcaccaaaca ttgcaatcgt
241 caacagcatc attagttatt cctgctggta gaactcttcc aagttttacc acagcagaac
301 tgggcacttc aaactccagt gcaaacttta cttttcctgg ttatcccatt catgtaccag
361 caggtgtgac actacagact gtatctggtc acctttataa agtcaatgta ccaattatgg
421 tgacagagac ttctggaaga gcaggtattc ttcagcatcc aattcagcaa gtatttcaac
481 agcttggcca gccttcagta atacaaacta gtgttccaca attgaatcca tggtctcttc
541 aagcaactac tgaaaaatca cagagaattg aaaccgtgct acagcaaccc gcaattctac
601 cttctgggcc agtagatagg aaacacttag aaaatgccac cagtgatata cttgtatctc
661 ctggaaatga gcataaaatc gtgcctgaag ctttgttgtg tcatcaggaa agttctcact
721 atatcagtct tccaggtgtt gtattttctc cacaggtctc tcaaacaaat tctgatgtgg
781 agtcagtgct cagtggttca gctagcatgg ctcaaaatct gcatgatgag tccctctcca
841 caagccctca tggggctctc caccagcacg tgactgatat tcagcttcat attcttaaaa
901 ataggatgta tggatgtgat tctgtaaagc aaccaagaaa tatagaggaa cccagcaaca
961 tacctgtatc agagaaggat tctaattctc aggtggattt aagcattcgg gttactgatg
1021 atgatattgg tgaaataatt caagtagatg gaagcggtga tacatcttcc aatgaagaaa
1081 taggaagtac aagagatgca gatgagaatg aatttctagg gaatattgac gggggagatc
1141 tgaaggtacc tgaagaagaa gctgacagta tttcaaatga ggattcagcc acaaacagta
1201 gtgataatga agaccctcaa gtaaacattg tagaagagga ccctttaaat tctggagatg
1261 atgttagtga acaggatgtg ccagacctgt ttgacacgga taatgtaatt gtctgtcagt
1321 atgataagat tcatcgaagc aagaacaaat ggaaattcta tttgaaagat ggtgttatgt
1381 gttttggagg gagagactat gtatttgcaa aagccattgg tgatgcagag tggtaaacct
1441 tgtgagctca gtacatctat tttgtgaaca tcagttggac tatattgcat attgtgaatt
1501 catttttatt ttgaatatag tccagcacag agctgttcaa atttttagtt cactgtatgg
1561 aatttaataa aattataatt cagatgcaga tacaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaa
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