LOCUS BC064493 1699 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens myogenic differentiation 1, mRNA (cDNA clone MGC:71135
IMAGE:5022419), complete cds.
ACCESSION BC064493
VERSION BC064493.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1699)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1699)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: f Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23111008.
FEATURES Location/Qualifiers
source 1..1699
/db_xref="H-InvDB:HIT000261413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71135 IMAGE:5022419"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1699
/gene="MYOD1"
/gene_synonym="MYOD"
/gene_synonym="PUM"
/db_xref="GeneID:4654"
/db_xref="HGNC:HGNC:7611"
/db_xref="MIM:159970"
CDS 63..1025
/gene="MYOD1"
/gene_synonym="MYOD"
/gene_synonym="PUM"
/codon_start=1
/product="myogenic differentiation 1"
/protein_id="AAH64493.1"
/db_xref="GeneID:4654"
/db_xref="HGNC:HGNC:7611"
/db_xref="MIM:159970"
/translation="MELLSPPLRDVDLTAPDGSLCSFATTDDFYDDPCFDSPDLRFFE
DLDPRLMHVGALLKPEEHSHFPAAVHPAPGAREDEHVRAPSGHHQAGRCLLWACKACK
RKTTNADRRKAATMRERRRLSKVNEAFETLKRCTSSNPNQRLPKVEILRNAIRYIEGL
QALLRDQDAAPPGAAAAFYAPGPLPPGRGGEHYSGDSDASSPRSNCSDGMMDYSGPPS
GARRRNCYEGAYYNEAPSEPRPGKSAAVSSLDCLSSIVERISTESPAAPALLLADVPS
ESPPRRQEAAAPSEGESSGDPTQSPDAAPQCPAGANPNPIYQVL"
BASE COUNT 353 a 579 c 497 g 270 t
ORIGIN
1 cactttgcta tctacagctt gggttgggcg aagccaggac cgtgccgcgc caccgccagg
61 atatggagct actgtcgcca ccgctccgcg acgtagacct gacggccccc gacggctctc
121 tctgctcctt tgccacaacg gacgacttct atgacgaccc gtgtttcgac tccccggacc
181 tgcgcttctt cgaagacctg gacccgcgcc tgatgcacgt gggcgcgctc ctgaaacccg
241 aagagcactc gcacttcccc gcggcggtgc acccggcccc gggcgcacgt gaggacgagc
301 atgtgcgcgc gcccagcggg caccaccagg cgggccgctg cctactgtgg gcctgcaagg
361 cgtgcaagcg caagaccacc aacgccgacc gccgcaaggc cgccaccatg cgcgagcggc
421 gccgcctgag caaagtaaat gaggcctttg agacactcaa gcgctgcacg tcgagcaatc
481 caaaccagcg gttgcccaag gtggagatcc tgcgcaacgc catccgctat atcgagggcc
541 tgcaggctct gctgcgcgac caggacgccg cgccccctgg cgccgcagcc gccttctatg
601 cgccgggccc gctgcccccg ggccgcggcg gcgagcacta cagcggcgac tccgacgcgt
661 ccagcccgcg ctccaactgc tccgacggca tgatggacta cagcggcccc ccgagcggcg
721 cccggcggcg gaactgctac gaaggcgcct actacaacga ggcgcccagc gaacccaggc
781 ccgggaagag tgcggcggtg tcgagcctag actgcctgtc cagcatcgtg gagcgcatct
841 ccaccgagag ccctgcggcg cccgccctcc tgctggcgga cgtgccttct gagtcgcctc
901 cgcgcaggca agaggctgcc gcccccagcg agggagagag cagcggcgac cccacccagt
961 caccggacgc cgccccgcag tgccctgcgg gtgcgaaccc caacccgata taccaggtgc
1021 tctgagggga tggtggccgc ccacccgccc gagggatggt gcccctaggg tccctcgcgc
1081 ccaaaagatt gaacttaaat gcccccctcc caacagcgct ttaaaagcga cctctcttga
1141 ggtaggagag gcgggagaac tgaagtttcc gcccccgccc cacagggcaa ggacacagcg
1201 cggttttttc cacgcagcac ccttctcgga gacccattgc gatggccgct ccgtgttcct
1261 cggtgggcca gagctgaacc ttgaggggct aggttcagct ttctcgcgcc ctcccccatg
1321 ggggtgagac cctcgcagac ctaagccctg ccccgggatg caccggttat ttgggggggc
1381 gtgagaccca gtgcactccg gtcccaaatg tagcaggtgt aaccgtaacc cacccccaac
1441 ccgtttcccg gttcaggacc actttttgta atacttttgt aatctattcc tgtaaataag
1501 agttgctttg ccagagcagg agcccctggg gctgtattta tctctgaggc atggtgtgtg
1561 gtgctacagg gaatttgtac gtttataccg caggcgggcg agccgcgggc gctcgctcag
1621 gtgatcaaaa taaaggcgct aatttataaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaa
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