LOCUS BC064477 1372 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens pim-3 oncogene, mRNA (cDNA clone IMAGE:6186546),
partial cds.
ACCESSION BC064477
VERSION BC064477.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1372)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1372
/db_xref="H-InvDB:HIT000261397"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6186546"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1372
/gene="PIM3"
/gene_synonym="pim-3"
/db_xref="GeneID:415116"
CDS <1..407
/gene="PIM3"
/gene_synonym="pim-3"
/codon_start=3
/product="PIM3 protein"
/protein_id="AAH64477.1"
/db_xref="GeneID:415116"
/translation="CLCGGRAKPCVPLGTRVYSPPEWIRYHRYHGRSATVWSLGVLLY
DMVCGDIPFEQDEEILRGRLLFRRRVSPECQQLIRWCLSLRPSERPSLDQIAAHPWML
GADGGAPESCDLRLCTLDPDDVASTTSSSESL"
BASE COUNT 225 a 409 c 414 g 324 t
ORIGIN
1 tctgcctctg tggtgggcgt gctaagccct gtgtcccctt aggcacccga gtgtacagcc
61 ccccggagtg gatccgctac caccgctacc acgggcgctc ggccaccgtg tggtcgctgg
121 gcgtgcttct ctacgatatg gtgtgtgggg acatcccctt cgagcaggac gaggagatcc
181 tccgaggccg cctgctcttc cggaggaggg tctctccaga gtgccagcag ctgatccggt
241 ggtgcctgtc cctgcggccc tcagagcggc cgtcgctgga tcagattgcg gcccatccct
301 ggatgctggg ggctgacggg ggcgccccgg agagctgtga cctgcggctg tgcaccctcg
361 accctgatga cgtggccagc accacgtcca gcagcgagag cttgtgagga gctgcacctg
421 actgggagct aggggaccac ctgccttggc cagacctggg acgcccccag accctgactt
481 tttcctgcgt gggccgtctc ctcctgcgga agcagtgacc tctgacccct ggtgaccttc
541 gctttgagtg ccttttgaac gctggtcccg cgggacttgg ttttctcaag ctctgtctgt
601 ccaaagacgc tccggtcgag gtcccgcctg ccctgggtgg atacttgaac cccagacgcc
661 cctctgtgct gctgtgtccg gaggcggcct tcccatctgc ctgcccaccc ggagctcttt
721 ccgccggcgc agggtcccaa gcccacctcc cgccctcagt cctgcggtgt gcgtctgggc
781 acgtcctgca cacacaatgc aagtcctggc ctccgcgccc gcccgcccac gcgagccgta
841 cccgccgcca actctgttat ttatggtgtg accccctgga ggtgccctcg gcccaccggg
901 gctatttatt gtttaattta tttgttgagg ttatttcctc tgagcagtct gcctctccca
961 agccccaggg gacagtgggg aggcagggga gggggtggct gtggtccagg gaccccaggc
1021 cctgattcct gtgcctggcg tctgtcctgg ccccgcctgt cagaagatga acatgtatag
1081 tggctaactt aaggggagtg ggtgaccctg acacttccag gcactgtgcc cagggtttgg
1141 gttttaaatt attgactttg tacagtctgc ttgtgggctc tgaaagctgg ggtggggcca
1201 gagcctgagc gtttaattta ttcagtacct gtgtttgtgt gaatgcggtg tgtgcaggca
1261 tcgcagatgg gggttctttc agttcaaaag tgagatgtct ggagatcata tttttttata
1321 caggtatttc aattaaaatg tttttgtaca tagtgaaaaa aaaaaaaaaa aa
//