LOCUS BC064364 2154 bp mRNA linear HUM 02-JAN-2004
DEFINITION Homo sapiens serologically defined colon cancer antigen 1, mRNA
(cDNA clone IMAGE:5555764), partial cds.
ACCESSION BC064364
VERSION BC064364.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2154)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2154)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: c Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759077.
FEATURES Location/Qualifiers
source 1..2154
/db_xref="H-InvDB:HIT000261327"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5555764"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2154
/gene="SDCCAG1"
/gene_synonym="FLJ10051"
/gene_synonym="NY-CO-1"
/db_xref="GeneID:9147"
CDS <1..1309
/gene="SDCCAG1"
/gene_synonym="FLJ10051"
/gene_synonym="NY-CO-1"
/codon_start=2
/product="SDCCAG1 protein"
/protein_id="AAH64364.1"
/db_xref="GeneID:9147"
/translation="NFLPPSYLMMGFSFLFKVDESCVWRHQGERKVRVQDEDMETLAS
CTSELISEEMEQLDGGDTSSDEDKEEHETPVEVELMTQVDQEDITLQSGRDELNEELI
QEESSEDEGEYEEVRKDQDSVGEMKDEGEETLNYPDTTIDLSHLQPQRSIQKLASKEE
SSNSSDSKSQSRRHLSAKERREMKKKKLPSDSGDLEALEGKDKEKESTVHIETHQNTS
KNVAAVQPMKRGQKSKMKKMKEKYKDQDEEDRELIMKLLGSAGSNKEEKGKKGKKGKT
KDEPVKKQPQKPRGGQRVSDNIKKETPFLEVITHELQDFAVDDPHDDKEEQDLDQQGN
EENLFDSLTGQPHPEDVLLFAIPICAPYTTMTNYKYKVKLTPGVQKKGKAAKTALNSF
MHSKEATAREKDLFRSVKDTDLSRNIPGKVKVSAPNLLNVKRK"
BASE COUNT 816 a 332 c 443 g 563 t
ORIGIN
1 gaattttctt cctccctcat atctaatgat ggggtttagc ttccttttta aggtagatga
61 gtcttgtgtt tggagacatc agggtgaacg aaaagtcaga gtacaggatg aagacatgga
121 gacactggca agttgtacaa gtgaactcat atcagaagaa atggaacaat tagatggagg
181 tgacacgagc agtgatgagg ataaagaaga acatgaaact cctgtggaag tagaactcat
241 gactcaggtt gaccaagagg atatcactct tcagagtggc agagatgaac taaatgagga
301 gctcattcag gaagaaagct ctgaagacga aggagaatat gaagaggtta gaaaagatca
361 ggattctgtt ggtgaaatga aggatgaagg ggaagagaca ttaaattatc ctgatactac
421 cattgacttg tctcaccttc aaccccaaag gtccatccag aaattggctt caaaagagga
481 atcttctaat tctagtgaca gtaaatcaca gagccggaga catttgtcag ccaaggaaag
541 aagggaaatg aaaaagaaaa aacttccaag tgactcagga gatttagaag cgttagaggg
601 aaaggataaa gaaaaagaaa gtactgtaca cattgaaact catcagaaca caagcaaaaa
661 tgttgcggct gtgcagccaa tgaaacgagg acaaaagagt aaaatgaaaa aaatgaaaga
721 aaaatacaaa gaccaggatg aagaagaccg tgaacttatc atgaagttgc tggggtctgc
781 aggttcaaac aaagaagaaa aagggaagaa ggggaagaaa ggaaaaacaa aggacgaacc
841 tgtgaagaaa cagccccaga aacctagagg tggacagagg gtctctgaca acattaagaa
901 agaaactccg ttccttgagg ttataactca tgagttacaa gactttgctg tagatgatcc
961 acatgatgac aaggaagagc aagatctgga tcaacaggga aatgaggaaa acctatttga
1021 ttctttgaca ggccagccac atcctgaaga tgtactactg tttgccattc caatatgtgc
1081 cccttacacc accatgacaa actacaaata taaagtgaaa cttactcctg gagtgcagaa
1141 aaagggaaaa gctgcaaaaa cagccttgaa tagtttcatg cattccaaag aagcaacagc
1201 aagagaaaaa gacttattcc gcagcgtaaa ggacacagat ttatcaagaa acattcctgg
1261 caaagtgaaa gtgtctgcac ccaatcttct gaacgtaaaa aggaaatagc tgaaatgaaa
1321 ttctaaaata tttgagaaga gccaatttta tagccttttg gaagttcaaa gatgaaagca
1381 ccatgtatca ggatttccgc attataaaaa tgaactaaac attgccttgc tatattcacc
1441 aaaaggactt acttcttgtt ttttcccagt tttatataga ggaaacactg tctatgatag
1501 gatttccaaa agtatttgtg gacagttaaa tgctaattaa tatacatctg tagttattct
1561 acattttctt gaaatttggg aggttaatac caagtattca tttcatgatg taaagaaact
1621 gaacagtgaa gtggcttgat tgcttaaact attgacttgg taagtctact gtatataaca
1681 tctaatatat atattacagg ccaaatgaac taaacattgc cttgctatat tcaccaaaag
1741 gacttaattc ttgttttttt cccagtttta tatagaggaa acactatgat aggatttcct
1801 aaagtatttg tggacagtta aatgctaatt atatacatct gtagttattc tacattttct
1861 tgaaatttga gaggttaata ccaagtattc atttcatgat gtaaagaaac tgaacagtga
1921 agtggcttga ttgcttaaac tattgacttg gtaagtctac tgtatataac atctaatata
1981 tatatattat aggccagcta caaggggttt aaatatttag gattgtgtct tgaaaactaa
2041 gtattggagt ggattttctt ctgctttcat tgatacttgt cagaaaaaaa tattagacca
2101 aaatgtaaaa tataagtaat aattctcatg aaaaaaaaaa aaaaaaaaaa aaaa
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