LOCUS BC063640 1048 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens suprabasin, mRNA (cDNA clone MGC:75533 IMAGE:4750640),
complete cds.
ACCESSION BC063640
VERSION BC063640.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1048)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1048)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1048
/db_xref="H-InvDB:HIT000261094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75533 IMAGE:4750640"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1048
/gene="SBSN"
/gene_synonym="UNQ698"
/db_xref="GeneID:374897"
/db_xref="HGNC:HGNC:24950"
/db_xref="MIM:609969"
CDS 13..756
/gene="SBSN"
/gene_synonym="UNQ698"
/codon_start=1
/product="suprabasin"
/protein_id="AAH63640.1"
/db_xref="GeneID:374897"
/db_xref="HGNC:HGNC:24950"
/db_xref="MIM:609969"
/translation="MHLARLVGSCSLLLLLGALSGWAASDDPIEKVIEGINRGLSNAE
REVGKALDGINSGITHAGREVEKVFNGLSNMGSHTGKELDKGVQGLNHGMDKVAHEIN
HGIGQAGKEAEKLGHGVNNAAGQAGKEADKAVQGFHTGVHQAGKEAEKLGQGVNHAAD
QAGKEVEKLGQGAHHAAGQAGKELQNAHNGVNQASKEANQLLNGNHQSGSSSHQGGAT
TTPLASGASVNTPFINLPALWRSVANIMP"
BASE COUNT 378 a 227 c 288 g 155 t
ORIGIN
1 cttcccagca atatgcatct tgcacgtctg gtcggctcct gctccctcct tctgctactg
61 ggggccctgt ctggatgggc ggccagcgat gaccccattg agaaggtcat tgaagggatc
121 aaccgagggc tgagcaatgc agagagagag gtgggcaagg ccctggatgg catcaacagt
181 ggaatcacgc atgccggaag ggaagtggag aaggttttca acggacttag caacatgggg
241 agccacaccg gcaaggagtt ggacaaaggc gtccaggggc tcaaccacgg catggacaag
301 gttgcccatg agatcaacca tggtattgga caagcaggaa aggaagcaga gaagcttggc
361 catggggtca acaacgctgc tggacaggcc gggaaggaag cagacaaagc ggtccaaggg
421 ttccacactg gggtccacca ggctgggaag gaagcagaga aacttggcca aggggtcaac
481 catgctgctg accaggctgg aaaggaagtg gagaagcttg gccaaggtgc ccaccatgct
541 gctggccagg ccgggaagga gctgcagaat gctcataatg gggtcaacca agccagcaag
601 gaggccaacc agctgctgaa tggcaaccat caaagcggat cttccagcca tcaaggaggg
661 gccacaacca cgccgttagc ctctggggcc tcggtcaaca cgcctttcat caaccttccc
721 gccctgtgga ggagcgtcgc caacatcatg ccctaaactg gcatccggcc ttgctgggag
781 aataatgtcg ccgttgtcac atcagctgac atgacctgga ggggttgggg gtgggggaca
841 ggtttctgaa atccctgaag ggggttgtac tgggatttgt gaataaactt gatacactaa
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//