LOCUS BC063000 1822 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens platelet-activating factor receptor, mRNA (cDNA clone MGC:74702 IMAGE:5176867), complete cds. ACCESSION BC063000 VERSION BC063000.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1822) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1822) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 135 Row: c Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47777315. FEATURES Location/Qualifiers source 1..1822 /db_xref="H-InvDB:HIT000260710" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:74702 IMAGE:5176867" /tissue_type="Brain, Lung, Testis, adult, pooled whole" /clone_lib="NIH_MGC_115" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1822 /gene="PTAFR" /gene_synonym="PAFR" /db_xref="GeneID:5724" /db_xref="HGNC:HGNC:9582" /db_xref="MIM:173393" CDS 128..1156 /gene="PTAFR" /gene_synonym="PAFR" /codon_start=1 /product="platelet-activating factor receptor" /protein_id="AAH63000.1" /db_xref="GeneID:5724" /db_xref="HGNC:HGNC:9582" /db_xref="MIM:173393" /translation="MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLY PCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTY CSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNT VPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPV QQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQ VTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQ IPGNSLKN" BASE COUNT 424 a 532 c 448 g 418 t ORIGIN 1 ttgccagaca gcatagaggc tgaggctggg gccaggaccc agacagagac acacggtcac 61 tgcagctgaa gccgctgccc ctgctacagg caccaccagg accagctgat cattccagcc 121 cacagcaatg gagccacatg actcctccca catggactct gagttccgat acactctctt 181 cccgattgtt tacagcatca tctttgtgct cggggtcatt gctaatggct acgtgctgtg 241 ggtctttgcc cgcctgtacc cttgcaagaa attcaatgag ataaagatct tcatggtgaa 301 cctcaccatg gcggacatgc tcttcttgat caccctgcca ctttggattg tctactacca 361 aaaccagggc aactggatac tccccaaatt cctgtgcaac gtggctggct gccttttctt 421 catcaacacc tactgctctg tggccttcct gggcgtcatc acttataacc gcttccaggc 481 agtaactcgg cccatcaaga ctgctcaggc caacacccgc aagcgtggca tctctttgtc 541 cttggtcatc tgggtggcca ttgtgggagc tgcatcctac ttcctcatcc tggactccac 601 caacacagtg cccgacagtg ctggctcagg caacgtcact cgctgctttg agcattacga 661 gaagggcagc gtgccagtcc tcatcatcca catcttcatc gtgttcagct tcttcctggt 721 cttcctcatc atcctcttct gcaacctggt catcatccgt accttgctca tgcagccggt 781 gcagcagcag cgcaacgctg aagtcaagcg ccgggcgctg tggatggtgt gcacggtctt 841 ggcggtgttc atcatctgct tcgtgcccca ccacgtggtg cagctgccct ggacccttgc 901 tgagctgggc ttccaggaca gcaaattcca ccaggccatt aatgatgcac atcaggtcac 961 cctctgcctc cttagcacca actgtgtctt agaccctgtt atctactgtt tcctcaccaa 1021 gaagttccgc aagcacctca ccgaaaagtt ctacagcatg cgcagtagcc ggaaatgctc 1081 ccgggccacc acggatacgg tcactgaagt ggttgtgcca ttcaaccaga tccctggcaa 1141 ttccctcaaa aattagtccc tgcttccagg cctgaagtct tctcctccat gaacatcatg 1201 gactgagctg ggggaagaag ggatatctac tgtggtctgg gcaccacctc tgtgggcact 1261 ggtgggccat tagatttgga ggctacctca cctgggcagg gatgatggca gagccaggct 1321 gttggaaaat ccagaactca aatgagcccc ttcatccgcc tgtgggcgca tactacagta 1381 actgtgactg atgactttat cctgagtccc ttaatcttat ggggccggaa ggaatgtcag 1441 ggccaggtgc agaccttggg ggaagacttt aaaccaccta gttctccccg atggggcatc 1501 ggtctaaagc tttgggggag tgggcgcagt ggctcacacc tgtaatccca gcactttggg 1561 aggccgaggt gggcagatca tgggtcaaga gatcgagacc atcctggcca acattgtaaa 1621 accccatctc tactaaaaca tacaaaaatt agccgggcat ggtggcacac gcctgtagtc 1681 ccagctactc aggaggctga ggcaggagaa tcgcttgaac ctgggaggca gaggttgcag 1741 tgaacctaga ttgcaccatt gcactctagc ctggcaacag agcgagattc catctcaaaa 1801 aaaaaaaaaa aaaaaaaaaa aa //