LOCUS BC060814 2184 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, mRNA (cDNA clone IMAGE:30333116), complete cds. ACCESSION BC060814 VERSION BC060814.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2184) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2184) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: b Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41281554 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2184 /db_xref="H-InvDB:HIT000260116" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:30333116" /tissue_type="Placenta, pre-eclamptic" /clone_lib="NIH_MGC_148" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2184 /gene="AGAP1" /gene_synonym="GGAP1" /db_xref="GeneID:116987" /db_xref="HGNC:HGNC:16922" /db_xref="MIM:608651" CDS 599..1777 /gene="AGAP1" /gene_synonym="GGAP1" /codon_start=1 /product="AGAP1 protein" /protein_id="AAH60814.1" /db_xref="GeneID:116987" /db_xref="HGNC:HGNC:16922" /db_xref="MIM:608651" /translation="MNYQQQLANSAAIRAEIQRFESVHPNIYSIYELLERVEEPVLQN QIREHVIAIEDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRYLTGTYVQEESP EGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEGEISFQTVYHYYS RMANYRNTSEIPLVLVGTQDAISSANPRVIDDARARKLSNDLKRCTYYETCATYGLNV ERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCSAQVSAVHISQTSNGGGSLS DYSSSVPSTPSTSQKELRIDVPPTANTPTPVRKQSKRRSNLFTSRKGSDPDKEKKGLE SRADSIGSGRAIPIKQGLPFFVLALTASTYLRPAGARARQSSPWPGRAEGWSDQPALC " BASE COUNT 444 a 678 c 683 g 379 t ORIGIN 1 ggggctcgga gcgggctccg cggcttgcaa ggcgcctgcg actcggtccc aggtcggcgg 61 gcggcgcacg gcgggctcgc gcgggggccc cggcgcgccg ggcggcgcag tacgcagcgc 121 gcggacccac gccacggcca ggagcccaga gcagcgcggc cacactgccc aggggtcggc 181 cctcggcccc ggcgctcgga gcgcggcggc tgcctgggct ttaatggctg ctccgcggag 241 cagcgcctag ggctggaagg cggctgcggc tcaggaagtc acccgagcaa gcctccttcg 301 gggccggccg cacccgccgc ggcgcgctcc atgggggcgc gctccccccg ggcggcccgc 361 tgacccggga cgccggggcc cgctcgctcg ccggccgcgc gtcccggcca tgaactgagc 421 ccgcgggcca gccccgcgcc tgctccgccc gcgcctttct tctcgcgcct cctccgcccg 481 ccgccggcgg gcccggctcc ccgggggctg cggcgccccg ggctcggcgg cccgcgggcc 541 ccggggcgcg gggcggcggc ggcggggggc gcgcggctcc gggcgcggcg cctgcaccat 601 gaactaccag cagcagctgg ccaactcggc tgccatccgg gccgagatcc agcgcttcga 661 gtcggtccac cccaacatct actccatcta cgagctgctg gagcgcgtgg aggagccggt 721 gctgcagaac cagatccggg agcacgtcat cgccatcgaa gatgccttcg tgaacagcca 781 ggaatggacg ctgagtcgat ctgtcccgga gctcaaagtg ggaattgtgg gtaacttggc 841 cagcggcaag tctgccctgg tgcaccggta cctgacgggc acatatgtcc aggaggagtc 901 tccggaaggt ggcaggttca agaaagagat tgtcgttgat ggacagagct atctgctgct 961 gatcagagat gaagggggcc ccccggaggc gcagtttgcc atgtgggtgg acgctgttat 1021 atttgtcttc agcttggagg gtgaaataag tttccagacc gtttaccact actacagtcg 1081 aatggccaac tatcggaaca cgagcgagat tcctctggtt ctggtgggaa cccaggatgc 1141 cataagttct gctaacccga gggtcatcga tgacgccagg gcgaggaagc tctccaacga 1201 cctgaaacgg tgcacgtact acgagacgtg tgctacatac gggctgaatg tggagagggt 1261 cttccaggac gttgcccaga agattgttgc cacaaggaag aagcagcagc tgtccatagg 1321 accctgcaag tcgctaccta attctcccag ccattcctcc gtctgttccg cgcaggtgtc 1381 tgccgtgcac atcagccaga caagtaatgg aggtgggagt ttaagcgact attcctcctc 1441 cgttccatcg actcccagca ccagccagaa ggaacttcgg atcgatgttc ctcccactgc 1501 caacacgccc acgcccgttc gcaagcagtc taagcgccgg tccaacctgt tcacctctcg 1561 gaaagggagc gacccagaca aagagaagaa aggcctggag agtcgtgcgg acagcattgg 1621 gagcggccga gccatcccaa ttaaacaggg cctgcccttc tttgtccttg cactgacagc 1681 cagcacttat ctcaggcctg ctggagcccg tgcccgtcag tcctccccct ggccaggcag 1741 ggccgagggg tggtcagacc agcccgcatt gtgctgaagg cccacaatca gcccagctgt 1801 ccggggccat gatgaattag cggtgggagt taacatagag gtgaactcca gatcggccga 1861 tagcttgcag gccgctgctg tttgtcctga cttcagcgca tctctgatag acctttgaca 1921 ccttccaaca aagaggttac aggagggaga gctggagaaa tggagcgctc ctccagaaag 1981 ttcggcaact cacaaaagac cccttaattt ctatagcggg caattcagtc cacaaaggaa 2041 ggaaatcaat gagcgtttac gctctttctt tgaggaacct ttttttaaag aaaaaaacat 2101 ttactggcgc tttgcatgtt ttgggtacaa gcagtggtag aaacataaaa cattaaaatc 2161 caagattgaa aaaaaaaaaa aaaa //