LOCUS BC055066 5623 bp mRNA linear HTC 19-OCT-2006
DEFINITION Mus musculus cDNA clone IMAGE:30030002, containing frame-shift
errors.
ACCESSION BC055066
VERSION BC055066.1
KEYWORDS HTC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 5623)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5623)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Minoru Ko
cDNA Library Preparation: Yulan Piao and Minoru Ko (National
Institute on Aging, NIH: http://lgsun.grc.nia.nih.gov/cDNA/)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 112 Row: a Column: 8
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..5623
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/clone="IMAGE:30030002"
/tissue_type="Blastocyst, mouse, 3.5 dpc"
/clone_lib="NIA Mouse Blastocyst cDNA Library (Long)"
/lab_host="DH10B"
/note="Vector: pSPORT1"
BASE COUNT 1878 a 1251 c 866 g 1628 t
ORIGIN
1 aagaggtaat ccgcggatcc atttattgta gttgaactac caacagaaca tataaacaaa
61 gggataaaag gagagatatt tttttattgt gcatacaatg ccgatttaga taaaaaaatt
121 cagttggcta cggatgttgt aggacaacaa ctgatacctc agagttggtt aaatgggaaa
181 tcttatatca ttaaaatgag ttgggtagat ggtaatgaag ctttttacga tgaaaaaaat
241 cttttactaa aataattgat atgaattggg gaaataaact aatactggtt tttattgcat
301 ttgcaggatt aatgtgcttt ctggtataca aagccatgaa cactcgttat gaactggtaa
361 gtaagactta ttaccaagat gagttgaggt atcaggataa aatagatgct aaagcaaatg
421 cttcagcaat cagtaatgtc aaaattgata cagataacga caatttaatt ctacaactac
481 ccgataattt tattggtcag tctgtgaaag gagatatctg gttgtattgt aaaactgatg
541 ctatcaagga tctccgtttg ccattaactg ctgatgaagc cggaagacaa ttcattccca
601 aaaagcaact catggccaat aagtatttat tgaagttgag ttgggagtct gccaacaaaa
661 aatattatac agaacaagat attgaactga atattcaatg agtgtagcat tgctcatatc
721 atctttatta ttaggattag ccagtagttt acattgtgta ggaatgtgcg ggcccttgat
781 tatgagtgta cctgttcaac atttaccgga gggaaaaaaa acaatcggta ttctgttata
841 tcaattggga agaattggca cttatgtagt attcggtgta atagcaggat tgttgggctg
901 gagagtatat gcagcaggtt ttcaacagct gttttccatc atgcttggta cgatattatt
961 attgatgttg tccggtagtt tttttctaaa gaaagtacat ggaagtaatt ggttgagtac
1021 aagcgtaact caaatgatgt tttgggctat taaacaacaa tcgccgatcg gaatgttttt
1081 gatggggtct gctaacggct tgctgccctg tggtatggta tacatagcac tcaccggagc
1141 catggcaagc ggaagtatag ccggtgcagc cttatttatg ttttcttttg gaatcggcac
1201 attacctgcc ttattggggt tggcattttg gggtgtaaaa ctgagttggc aaactcgcca
1261 ctacatgcaa aaagctgtac cctatgtggt tgctatgacc ggtattttat tgattctcag
1321 ggggctgaat ctaaatattc cttacatcag tccattcctc tctgaacgta gtacagatac
1381 gatatcctgt cattgatcct ttaacaaatc attgttaaac cattgacatt ttcttctgtc
1441 tattatatag aactttgcac taggcaacag taaagaaaga aaaagtatct atttagaaag
1501 tattaacaaa ttcctgaaat cttttggcac tgaatttgcg tttatatcaa tataagtaag
1561 tagtcaattt tctcataagc agttagtttt ggttgcgtcc cctgtttcca caggggacaa
1621 tttttttata taaaccgaag tctatgctgc tgtttctgaa tgtattagct agcttttgca
1681 ggttgtttct gaaggaaaaa agtcaaagaa aaagccaatg ctgcaaaggc acctacactg
1741 tctgcaagga tatcagcttc ttcaaaagat cggttgacga tcagttccct ttgcacaaac
1801 tccatgatgg ttccataagc tactgatgaa caagaaatga cccaaaacca gattcttctt
1861 ctgccattat tccaattgct tttcatagcc ggccaatgaa acaaaagact caataaacca
1921 aaaagcccaa tatgtaccag tttatcaaac tgaggtattt tctgaaacca ccaagcggca
1981 gggaaattct ttgtgcccgg taaacagagc aaaatgacac taatgataaa gaaaatgaat
2041 gctggaataa aatgaatgat tttcaaaata agggactatt tatgccatga agcacaaaaa
2101 tagacttcgc ctagaaacaa actgttgtga ttaggttaat aagagagaat gactacccgt
2161 ttacaccacc aaatacctgt aattggtcca aattcggagt tggactgcct ccgcgttttt
2221 caagagtgat ggcgaaagca gttgcattac tgatattttt cattttacaa agaccattgc
2281 aaatatcaac catacctgca tcaacaggtt taccgtcaac aatagcccac aattgatatt
2341 gagtattagc gtcagtttga ggtaggcggt tagtgagtag gtatacttca ttgtttttct
2401 tatcccagaa aacagtggcc agcttattct catctgcttt cacgccgggt aatgacactt
2461 ttgtatatgc gggatcactc atgatttgca ttccctggta caaatccagt cccttagcct
2521 gcagggtctg attctgcgcc aataaactgg acttttcaat caataatgcc tggtattggg
2581 aagaagcttc acgaaattga cgatagaaat atacattggt agcagcactt actactaaaa
2641 gtatcacaga agccgcagct acatatctta accacccaat gcctggagta gacatcgata
2701 ctactttacc agtagtacca gtatcagtta tatcagaaaa ttctccggcg atctccgcta
2761 gaatattggc ttttacatgt gcggcaggtt gaatggcatt ggccatagcg ttttgctcga
2821 gcgacagttc aaacgcatca atagcagccc tgatttcggg gtattgacgt gagtactgtt
2881 ccaactcggc acgctcctga tcatcggcca tgcctaaaac atagctctca atgattccgc
2941 tttctatgta tgcctttata tccatttatg gtttaataat gcctcttaat tgtgttaatg
3001 ctgagcgtag ccttgttttc acggtaccca aaggtatatc caacattttg gatatctcat
3061 cttgggtaaa gccttgaaaa taagacagat caatcaatac gcgatgttcc tctttcaaca
3121 ggtgcaccac ttttcgtaag ccaatttgat ctacttgtaa ttgtgcagtc ccggctgata
3181 catatacgtc ttccgataat tcacggtttt gaagtcgaca agaggtaatc ctattaatct
3241 tcattcttct actatcccca atcctaattt caatatcaaa cctaattaaa cacatcaact
3301 tcccactgta caccaccaca tcaatcaaat tctccttcat tattagcctc ttacccctat
3361 taatattttt ccacaataat atagaatata taattacaac ctggcactga gtcaccataa
3421 attcaataga acttaaaata agcttcaaaa ctgacttttt ctctatcctg tttacatctg
3481 tagccctttt tgtcacatga tcaattatac aattctcttc atgatatata cactcagacc
3541 caaacatcaa tcgattcatt aaatatctta cactattcct gattaccatg cttatcctca
3601 cctcagccaa caacatattt caacttttca ttggctgaga aggggtggga attatatctt
3661 tcctactaat tggatgatgg tacggacgaa cagacgcaaa tactgcagcc ctacaagcaa
3721 tcctctataa ccgcatcgga gacatcggat tcattttagc tatagtttga ttttccctaa
3781 acataaactc atgagaactt caacagatta tattctccaa caacaacgac aatctaattc
3841 cacttatagg cctattaatc gcagctacag gaaaatcagc acaatttggc ctccacccat
3901 gactaccatc agcaatagaa ggccctacac cagtttcagc actactacac tcaagtacaa
3961 tagtagttgc aggaattttc ctactggtcc gattccaccc cctcacgact aataataact
4021 ttattttaac aactatactt tgcctcggag ccctaaccac attatttaca gctatttgtg
4081 ctctcaccca aaacgacatc aaaaaaatca ttgccttctc tacatcaagc caactaggcc
4141 tgataatagt gacgctagga ataaaccaac cacacctagc attcctacac atctgtaccc
4201 acgcattctt caaagctata ctctttatat gctctggctc aatcattcat agcctggcag
4261 acgaacaaga catccgaaaa ataggaaaca tcacaaaaat cataccattc acatcatcat
4321 gcctagtaat cggaagcctc gccctcacag gaataccatt cctaacaggg ttctactcaa
4381 aagacctaat tattgaagca attaatacct gcaacaccaa cgcctgagcc ctactaatta
4441 caccaatcgc cacttctata acagctatgt acagcatacg aatcatttac ttcgtaacaa
4501 taacaaaacc gcgtttcccc ccccctaatc tccattaacg aaaatgaccc agacctcata
4561 aacccaatca aacgcctagc attcggaagc atctttgcag gatttgtcat ctcatataat
4621 attccaccaa ccagcattcc agtcctcaca ataccatgat ttttaaaaac cacagcccta
4681 attatttcag tattaggatt cctaatcgca ctagaactaa acaacctaac cataaaacta
4741 tcaataaata aagcaaatcc atattcatcc ttctcaactt tactggggtt tttcccatct
4801 attattcacc gcattacacc cataaaatct ctcaacctaa gcctaaaaac atccctaact
4861 ctcctagact tgatctggtt agaaaaaacc atcccaaaat ccacctcaac tcttcacaca
4921 aacataacca ctttaacaac caaccaaaaa ggcttaatta aattgtactt tatatcattc
4981 ctaattgaca tcatcttaat tattatctta tactcaatta atctcgagta atctcgataa
5041 taataaaaat acccgcaaac aaagatcacc cagctactac catcattcaa gtagcacaac
5101 tatatattgc cgctacccca atccctcctt ccaacataac tccaacatca tcaacctcat
5161 acatcaacca atctcccaaa ccatcaagat taattactcc aacttcatca taataattaa
5221 gcacacaaat taaaaaaaac ctctataatc acccccaata ctaaaaaacc caaaattaat
5281 cagttagatc cccaagtctc tggatattcc tcagtagcta tagcagtcgt atatccaaac
5341 acaaccaaca tcccccctaa ataaattaaa aaaactatta aacctaaaaa cgatccacca
5401 aaccctaaaa ccattaaaca accaacaaac ccactaacaa ttaaacctaa acctccataa
5461 ataggtgaag gctttaatgc taacccaaga caaccaacca aaaataatga acttaaaaca
5521 aaaatataat tattcattat ttctacacag cattcaactg cgaccaatga catgaaaaat
5581 catcgttgta attcaactac agaaacacct aaaaaaaaaa aaa
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