LOCUS BC053622 1467 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens protein prenyltransferase alpha subunit repeat
containing 1, mRNA (cDNA clone IMAGE:6161581), partial cds.
ACCESSION BC053622
VERSION BC053622.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1467)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1467)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1467
/db_xref="H-InvDB:HIT000259317"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6161581"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1467
/gene="PTAR1"
/db_xref="GeneID:375743"
CDS <1..1213
/gene="PTAR1"
/codon_start=2
/product="PTAR1 protein"
/protein_id="AAH53622.1"
/db_xref="GeneID:375743"
/translation="NMAETSEEVAVLVQRVVKDITNAFRRNPHIDEIGLIPCPEARYN
RSPIVLVENKLGVESWCVKFLLPYVHNKLLLYRTRKQWLNRDELIDVTCTLLLLNPDF
TTAWNVRKELILSGTLNPIKDLHLGKLALTKFPKSPETWIHRRWVLQQLIQETSLPSF
VTKGNLGTIPTERAQRLIQEEMEVCGEAAGRYPSNYNAWSHRIWVLQHLAKLDVKILL
DELSSTKHWASMHVSDHSGFHYRQFLLKSLISQTVIDSSVMEQNPLRSEPALVPPKDE
EAAVSTEEPRINLPHLLEEEVEFSTDLIDSYPGHETLWCHRRHIFYLQHHLNAGSQLS
QAMEVDGLNDSSKQGYSQETKRLKRTPVPDSLGLEMEHRFIDQVLSTCRNVEQARFAS
AYRKWLVTLSQ"
BASE COUNT 462 a 311 c 316 g 378 t
ORIGIN
1 caacatggcc gagaccagcg aggaggtggc ggtgctggtg cagcgggttg tgaaggacat
61 cactaacgcc ttcaggagga acccacacat agatgaaatt ggcctgatcc catgtcctga
121 agctaggtat aaccggagtc ccatagtcct ggttgaaaac aaactgggtg tggagagctg
181 gtgtgtcaag ttccttttac catatgtcca caacaagctc cttttgtaca gaacaagaaa
241 gcaatggctg aacagagatg aattgataga tgtcacatgt accctgctgc ttctaaaccc
301 agactttacc actgcatgga acgtgaggaa agagctgatc ctctctggca ctttaaatcc
361 aattaaggat ttacatctgg gaaaactcgc cttaaccaag tttccaaaga gtccagaaac
421 atggattcac aggcgatggg tgctacaaca gctaattcag gaaacctcct tgccttcctt
481 tgtgaccaaa ggaaacttgg gaacaattcc cacagaaagg gcacagcgac tcatacaaga
541 agagatggag gtctgtggtg aagcagcagg gagataccca agcaactata atgcttggtc
601 ccatcgcatc tgggttttac agcacttggc caagctagat gtcaagattc ttcttgatga
661 actatcttct actaaacatt gggcatctat gcacgtttca gaccacagtg gatttcacta
721 ccgccagttt ttgcttaagt ctttgattag ccaaactgtg atagacagtt ctgtgatgga
781 gcaaaatcct ttgagaagtg agccagccct agttcctcca aaagatgaag aagcagcagt
841 ttcaacagaa gaaccaagga ttaatcttcc ccatcttcta gaagaagaag ttgaattcag
901 cactgatctt attgattcct acccaggaca tgaaaccctt tggtgtcata ggcggcatat
961 tttctacctt cagcatcact taaatgcagg ctcccagctg tctcaagcaa tggaagtaga
1021 tggactgaat gactctagca agcaaggcta ttcccaggaa accaaacgcc tgaagcggac
1081 gccagttcca gactccctag gcctagaaat ggagcacagg ttcattgatc aagtattgtc
1141 cacctgtcgg aacgtggagc aagccaggtt tgccagtgca tacaggaaat ggctggttac
1201 tttgagtcaa tgaaagaggt gaattagtcc tacaaggttc cccttttagt gcaatattgc
1261 tttcttttat tatttacata gttgcatgaa ctgtttacta ttattggcta accatatgtt
1321 cttcgtcttt aggttgaaag tccatagtaa atctttcatt ttatttattt tgttaataac
1381 tggcattcct gtggggataa aataatcgta tagttccaaa aaaaaaaaaa aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//