LOCUS BC053530 3769 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens retinitis pigmentosa 2 (X-linked recessive), mRNA (cDNA clone MGC:61616 IMAGE:3871941), complete cds. ACCESSION BC053530 VERSION BC053530.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3769) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3769) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 115 Row: a Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5902059. FEATURES Location/Qualifiers source 1..3769 /db_xref="H-InvDB:HIT000053900" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:61616 IMAGE:3871941" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3769 /gene="RP2" /gene_synonym="TBCCD2" /db_xref="GeneID:6102" /db_xref="HGNC:HGNC:10274" /db_xref="MIM:312600" CDS 110..1162 /gene="RP2" /gene_synonym="TBCCD2" /codon_start=1 /product="retinitis pigmentosa 2 (X-linked recessive)" /protein_id="AAH53530.1" /db_xref="GeneID:6102" /db_xref="HGNC:HGNC:10274" /db_xref="MIM:312600" /translation="MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSG LKDETVGRLPGTVAGQQFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFF RNCRDCKCTLACQQFRVRDCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFK DAGLSIFNNTWSNIHDFTPVSGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANR SIVPISRGQRQKSSDESCLVVLFAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAED AQRVFREKAPDFLPLLNKGPVIALEFNGDGAVEVCQLIVNEIFNGTKMFVSESKETAS GDVDSFYNFADIQMGI" BASE COUNT 1161 a 626 c 712 g 1270 t ORIGIN 1 gcggggcgtt gtccggagag ctgcgaggcc ggggttccca gggttcacgc cacactctag 61 gaagtgcctg agctagtgag ctggccaacg agctccgcgg gctgggacca tgggctgctt 121 cttctccaag agacggaagg ctgacaagga gtcgcggccc gagaacgagg aggagcggcc 181 aaagcagtac agctgggatc agcgcgagaa ggttgatcca aaagactaca tgttcagtgg 241 actgaaggat gaaacagtag gtcgcttacc tgggacggta gcaggacaac agtttctcat 301 tcaagactgt gagaactgta acatctatat ttttgatcac tctgctacag ttaccattga 361 tgactgtact aactgcataa tttttctggg acccgtgaaa ggcagcgtgt ttttccggaa 421 ttgcagagat tgcaagtgca cattagcctg ccaacaattt cgtgtgcgag attgtagaaa 481 gctggaagtc tttttgtgtt gtgccactca acccatcatt gagtcttcct caaatatcaa 541 atttggatgt tttcaatggt actatcctga attagctttc cagttcaaag atgcagggct 601 aagtatcttc aacaatacat ggagtaacat tcatgacttt acacctgtgt caggagaact 661 caactggagc cttcttccag aagatgctgt ggttcaggac tatgttccta tacctactac 721 cgaagagctc aaagctgttc gtgtttccac agaagccaat agaagcattg ttccaatatc 781 ccggggtcag agacagaaga gcagcgatga atcatgctta gtggtattat ttgctggtga 841 ttacactatt gcaaatgcca gaaaactaat tgatgagatg gttggtaaag gctttttcct 901 agttcagaca aaggaagtgt ccatgaaagc tgaggatgct caaagggttt ttcgggaaaa 961 agcacctgac ttccttcctc ttctgaacaa aggtcctgtt attgccttgg agtttaatgg 1021 ggatggtgct gtagaagtat gtcaacttat tgtaaacgag atattcaatg ggaccaagat 1081 gtttgtatct gaaagcaagg agacggcatc tggagatgta gacagcttct acaactttgc 1141 tgatatacag atgggaatat gaagtgcaat gtggaaccag gacttggtat taagcctttc 1201 ccaacttgtg aatatagaat ttgataatac acttttgtgt attagcaatg gtttttacta 1261 atgctaaaac ttttaaagtt tattttttaa taaattgttg agtattacat catttacttg 1321 aggttcaaaa ataattcatt ttaaattaag tagttttaat cagcttaaaa gctatttaac 1381 ccattttaat aagcttgcag ttttgtttct ctgcatatga tattcttatt agaaaacaga 1441 agtagctaaa agtttattat tttaatccta tttaaatgtt ctttcaaatc tctaataatt 1501 taaactttcc tcagtgctcc atgatacttt ttttgagact ccatatcatt gcttatttta 1561 cctttttcaa tttagaggga tttgttacta gtcgatcaat tagaatgaac ctatgcacat 1621 ttttatgtac acatatccag ttatataatt gcttcctagt tgcattatat ggcaaatgag 1681 attttgtaca tggagttgac ataatacttt gtaaattgaa ttttttaaag aaataggcat 1741 ttgataacca gcttggcaag taactctact aacagatgtt ggtatagcta tttaaagact 1801 acttcgtaag tagtatgatt atttgaataa attacacatt gtttagtttt ttaatacaac 1861 tgctatatga ctcttctgct tcctgataag aaaaggtata tgcaatgcta aaactgtaga 1921 agcccaatca ccagcagttt ttaaaaaggt gataactttt attagctctt gtgggctatc 1981 aagagaatta gaacaaaacc ttgtgacttt taggtaagaa ataggcatga tgataagcta 2041 tgcagattat taaaaagctt gatacatttg atttttcatt agatatgcca ttcatatcaa 2101 gtaatgttca agtatgataa aattattttg gttgctttaa agcactgttt cccaaatcta 2161 cctgatcata ataatttacc aggaagcaga ggagagctac ttgtttaaaa atccacattc 2221 ttggacccaa tcctcagatg cacggattca gtcttcaggg gaaactctgt tttaaggggt 2281 atgttgtaat ctaaagtaat tggttcagga ggtgtcaata ggttgaactt gtgagaaggc 2341 actgaatctg ccatccacat cacatatagc agctattatg aaatcagctt tcataggcct 2401 atttttaaaa ggaatctgaa atttaattct attttgataa aactaagact gaaaataacc 2461 acttgtaaac attcctatga ttgttactaa aatgtatttt catgtttaaa atgtttttgg 2521 atatttttgg gttaataact actacattga attgcatgtt aaggtgcaga aataatacat 2581 taaaagattt tcactttaaa ttaattagta atattgagcg ctcaccctgt gcgtggcctt 2641 gtgctaacca ttagcactgc atcatttcaa ttcttttata agggcattca atactacaaa 2701 atcaacatga tttcataagg tgcaaataaa agttggtgac agatttaata taattttgat 2761 cacaatttac aaatgatctt tgcaaatagt ggtcagacgg cattagtttt tcccttagtt 2821 aagctaaatt aaagggactc catcctgtta tgattatatt attattatta ttattattat 2881 ttttgaggtg gagtttcact cttgttgccc aagctggagt gcaatggcgc gatctcggct 2941 caccacaaca tccgcctcct gggttcaagc gattctcctg cctcagcctc ctgagtagct 3001 gggaatacag gcatgcgcca ctacacctgg ctaatttttg tatttttagt tgagatgggg 3061 tttttccacg ttggtcaggc tggtctcgaa ctcctgacct caggtgatcc gtccacctca 3121 gcctcccaaa gagctgggat tacaggtgtg agctaccgcg cctggccatg atgatattat 3181 taaacaccat tattcacatt tcaaataata acaatacttt ttgtttttca aaaataaaat 3241 gcaatgttat ataaagctat aaactaagtt ctttatgata tttgagcaac aactcaggaa 3301 tataacatat aagggagatg ttaatttaaa aatttccact acacttatta tctattaacc 3361 aaagcttaaa attttgtatt cttctgttag ataagacctt ttacccattt aatttgtctt 3421 taaggacagt catttggctt ctgaatgttt gaaacgattt taaaaaataa gtagtgctat 3481 ggttgtttct ataattctaa cctttgatag taatcagaat gtattacatt tcatttctga 3541 atagcttttg aatttatgaa aaattattaa caatgaaaaa ttggtaattt tattaagtta 3601 tatgtgttta aatattatat tagcttattt ctcttgcatt aatagtactg ctgtttttgt 3661 tttgcttctt tatatttatg tctagctttt atatgtaatt tatctagtgt ttataaaatg 3721 tgatttgtaa taaatgttgt taaaatgaaa aaaaaaaaaa aaaaaaaaa //