LOCUS BC052991 4701 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sphingosine-1-phosphate lyase 1, mRNA (cDNA clone MGC:60255 IMAGE:6150776), complete cds. ACCESSION BC052991 VERSION BC052991.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4701) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4701) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 110 Row: k Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31982935. FEATURES Location/Qualifiers source 1..4701 /db_xref="H-InvDB:HIT000053862" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:60255 IMAGE:6150776" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..4701 /gene="SGPL1" /gene_synonym="KIAA1252" /gene_synonym="SPL" /db_xref="GeneID:8879" /db_xref="HGNC:HGNC:10817" /db_xref="MIM:603729" CDS 211..1917 /gene="SGPL1" /gene_synonym="KIAA1252" /gene_synonym="SPL" /codon_start=1 /product="sphingosine-1-phosphate lyase 1" /protein_id="AAH52991.1" /db_xref="GeneID:8879" /db_xref="HGNC:HGNC:10817" /db_xref="MIM:603729" /translation="MPSTDLLMLKAFEPYLEILEVYSTKAKNYVNGHCTKYEPWQLIA WSVVWTLLIVWGYEFVFQPESLWSRFKKKCFKLTRKMPIIGRKIQDKLNKTKDDISKN MSFLKVDKEYVKALPSQGLSSSAVLEKLKEYSSMDAFWQEGRASGTVYSGEEKLTELL VKAYGDFAWSNPLHPDIFPGLRKIEAEIVRIACSLFNGGPDSCGCVTSGGTESILMAC KAYRDLAFEKGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLTKMMEVDVRAMRRAI SRNTAMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLE HPFDFRVKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTI AGSRPGGISAACWAALMHFGENGYVEATKQIIKTARFLKSELENIKGIFVFGNPQLSV IALGSRDFDIYRLSNLMTAKGWNLNQLQFPPSIHFCITLLHARKRVAIQFLKDIRESV TQIMKNPKAKTTGMGAIYGMAQTTVDRNMVAELSSVFLDSLYSTDTVTQGSQMNGSPK PH" BASE COUNT 1125 a 1099 c 1164 g 1313 t ORIGIN 1 ggcgaggccg gcggctgccg ggcctccaat ctcggcggcg gcggcggcaa caggggagcc 61 tgggtctcgc ggcctgcgag tccgtcgcgt gctgagggag acgcaggagg tggagccggc 121 cgggtgctcg agggaaggag actggaagct ggttccggcg tgaggagagt ctgaaaaagg 181 ggagcgcgga gaggaggctg gaagaggaag atgcctagca cagaccttct gatgttgaag 241 gcctttgagc cctacttaga gattttggaa gtatactcca caaaagccaa gaattatgta 301 aatggacatt gcaccaagta tgagccctgg cagctaattg catggagtgt cgtgtggacc 361 ctgctgatag tctggggata tgagtttgtc ttccagccag agagtttatg gtcaaggttt 421 aaaaagaaat gttttaagct caccaggaag atgcccatta ttggtcgtaa gattcaagac 481 aagttgaaca agaccaagga tgatattagc aagaacatgt cattcctgaa agtggacaaa 541 gagtatgtga aagctttacc ctcccagggt ctgagctcat ctgctgtttt ggagaaactt 601 aaggagtaca gctctatgga cgccttctgg caagagggga gagcctctgg aacagtgtac 661 agtggggagg agaagctcac tgagctcctt gtgaaggctt atggagattt tgcatggagt 721 aaccccctgc atccagatat cttcccagga ctacgcaaga tagaggcaga aattgtgagg 781 atagcttgtt ccctgttcaa tgggggacca gattcgtgtg gatgtgtgac ttctggggga 841 acagaaagca tactgatggc ctgcaaagca tatcgggatc tggcctttga gaaggggatc 901 aaaactccag aaattgtggc tccccaaagt gcccatgctg catttaacaa agcagccagt 961 tactttggga tgaagattgt gcgggtccca ttgacgaaga tgatggaggt ggatgtgcgg 1021 gcaatgagaa gagctatctc caggaacact gccatgctcg tctgttctac cccacagttt 1081 cctcatggtg taatagatcc tgtccctgaa gtggccaagc tggctgtcaa atacaaaata 1141 ccccttcatg tcgacgcttg tctgggaggc ttcctcatcg tctttatgga gaaagcagga 1201 tacccactgg agcacccatt tgatttccgg gtgaaaggtg taaccagcat ttcagctgac 1261 acccataagt atggctatgc cccaaaaggc tcatcattgg tgttgtatag tgacaagaag 1321 tacaggaact atcagttctt cgtcgataca gattggcagg gtggcatcta tgcttcccca 1381 accatcgcag gctcacggcc tggtggcatt agcgcagcct gttgggctgc cttgatgcac 1441 ttcggtgaga acggctatgt tgaagctacc aaacagatca tcaaaactgc tcgcttcctc 1501 aagtcagaac tggaaaatat caaaggcatc tttgtttttg ggaatcccca attgtcagtc 1561 attgctctgg gatcccgtga ttttgacatc taccgactat caaacctgat gactgctaag 1621 gggtggaact tgaaccagtt gcagttccca cccagtattc atttctgcat cacattacta 1681 cacgcccgga aacgagtagc tatacaattc ctaaaggaca ttcgagaatc tgtcactcaa 1741 atcatgaaga atcctaaagc gaagaccaca ggaatgggtg ccatctatgg catggcccag 1801 acaactgttg acaggaatat ggttgcagaa ttgtcctcag tcttcttgga cagcttgtac 1861 agcaccgaca ctgtcaccca gggcagccag atgaatggtt ctccaaaacc ccactgaact 1921 tggacccttt ctagtctcaa ggggattcca gccttcagaa ggttcttggg atatggaaca 1981 ggccgtgcac aactttgaca tctggtcttg ctccatagag cacaactcaa gatagaccat 2041 gagacagctt gagcctcagg attcttgttc ttcctcttat cttccttttg tggtttttaa 2101 tttgaagacc ccagagaatt ccattacata atgattttgc ccttgttata aatgttaccc 2161 taggaattgt tttaaccatt tccttttcta aactctctag ctttcaactt tacttaaaca 2221 ttgtgtggta gctctgacct gtcctgattc tttagagaag ctggggtaca gtttatgaga 2281 tagctagagc ttctttgtta tctcaggcag gaggcgttta cataacagat gtttcctcag 2341 ctgggtgtga ggtatactct aagcaggagg ctttttcagc cttctctctc tttttttttt 2401 tttttttttt ttgagatgga attttgctct tttgcccagt ctggagtgca gtggcatgat 2461 ctcagctcac tgcaacctcc acccactggg ttcaagcgat tcttctgcct cagcctcccg 2521 agtagctggg attaccggca cccaccacca cgcctggcta atttttcaat tttctttttc 2581 agtagagacg ggttcaccgt gttggccagg ctggtcttga actcctgacc tcaggtgata 2641 cccgcccccc cgcctcagcc tcccaaagtg ctgggattac aggcgtgagc caccgtgcct 2701 ggccctgtct ctcttaagag taggttcatt gtctgtctta gagtcacttc tattgcaact 2761 cattttcttt ttccagggca cagatcgacc aagctgccgt tccctattct gcaggacagg 2821 actattctag catacctgct tcgtccaccc aggcagggtt tggggtggtc tcttctgtgc 2881 ctgcagtccc catttgacac ttggttgcca ccatctttgg agattattgt ttggaatgat 2941 gcttccattg gctttttctt gttaccatgg actaggaaga aaacatggtt tccaaataat 3001 ctgggagctt ttggccatgg tgccgccttc ctgaattggc agtggtcaga gcacacctga 3061 accctatcct gggctggtga tgagcagaaa tcagaccttt ttctatgctt ttttgaatat 3121 cagagtagga tgaacaccca gattcaaata tgtcaccaaa gttggtggtg gtccttccct 3181 gcacccttgc gttaagccat tatgtaatga aaatgtgttt gcttgaagga acagctcaaa 3241 gcaccttcac aagttgcctt gacttaccct aggtgggtgt gaaagagcac ccgtagcaag 3301 gaaaattttc tctattagtg tgttcttctg cctcttcccc cttgattcag ctttcagagg 3361 tactatggca gttttgcctc aggtgctgaa catttctcag ccctggctaa aagggagcag 3421 cacagggaga gaaacaggat aggaaagcag aatggcgagc agcctatggc ccagggcctg 3481 taatcccttc ccaagactag ctgctcaggg tggtgcaggg acaggaccag accctgcgcc 3541 tatttcctgc cttctttccc ctatagggaa ctctgtaggc tgagccactg tcctgctctt 3601 atgacattat atcttgtgcc tttctcctca gcagtgagca gtgagctact cctggcccag 3661 gccctagggg aaatggatca gtctttgagg tttctatttg gggaggggag tacttaagat 3721 gagtcaaaag acactttcct ctgttccatt ccccatctca gggactcctg aatattcagc 3781 ctctccaggc tggtgtcttc tagtttcccc cactgggaat gctggctggg agagccatga 3841 ctaccagact tttcctcagg ctccttggca tgttagtctg aattgttctt gagcactgta 3901 ctactgaccc aacaactgtg actagctggc cacgccattc agggctggtg tggcatttat 3961 gtgtgtgtgt gtgtgtgtgt gtttttcctg tttgcccagc agtgcattgt gggttccaag 4021 agtgggtagt gtgtgtatgt gtgtgtgtca gagggagacc tggcaggcac ctctttgaga 4081 gtagctgtgg tcagagctgt ttggtcagtg cattatgttg aatgaggtcc aggaacccag 4141 agccacccag cagacaccac tgtggcttgc cagctgccaa gatggagaag catgtgcccc 4201 tgtagagcgt ctccccagaa ccagaccccg agccactcgc ttcctctgtg ctgtgacaac 4261 attggtgcca ggggagatgg tgtttttcaa agggacctac tgtagccact ttaatttaca 4321 attaagagcc ttagtttgac ttaacacttt tgtaggcttt tcattgtgta tttttgtgta 4381 tgtgtgcata tagcagctac tctgtagcag aggtgggtag agacacttaa tagtatcatg 4441 tcgcatgcag atgtcacatc ggcctctgca aaaactgtac tgtcttgttt ctgcattaga 4501 cttaagtagt catgtgaata tactgctatg tcacttttaa tattacgagt tttatacttg 4561 gaaaatggta cttgcttctt ttaaatctct gtcttctcta acctccccct tcccatttca 4621 atgctccctt cctaatttca gcaataatct caaaaagcaa ttaaatagtt aaatgaccct 4681 aattgtaaaa aaaaaaaaaa a //