LOCUS       BC052977                3692 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens tumor necrosis factor receptor superfamily, member 1B,
            mRNA (cDNA clone MGC:60023 IMAGE:6198614), complete cds.
ACCESSION   BC052977
VERSION     BC052977.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3692)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3692)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. James R. Lupski
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 110 Row: n Column: 2
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 23312365.
FEATURES             Location/Qualifiers
     source          1..3692
                     /db_xref="H-InvDB:HIT000053849"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:60023 IMAGE:6198614"
                     /tissue_type="Peripheral Nervous System, sympathetic
                     trunk"
                     /clone_lib="Lupski_sympathetic_trunk"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3692
                     /gene="TNFRSF1B"
                     /gene_synonym="CD120b"
                     /gene_synonym="p75"
                     /gene_synonym="p75TNFR"
                     /gene_synonym="TBPII"
                     /gene_synonym="TNF-R-II"
                     /gene_synonym="TNF-R75"
                     /gene_synonym="TNFBR"
                     /gene_synonym="TNFR80"
                     /db_xref="GeneID:7133"
                     /db_xref="HGNC:HGNC:11917"
                     /db_xref="MIM:191191"
     CDS             88..1473
                     /gene="TNFRSF1B"
                     /gene_synonym="CD120b"
                     /gene_synonym="p75"
                     /gene_synonym="p75TNFR"
                     /gene_synonym="TBPII"
                     /gene_synonym="TNF-R-II"
                     /gene_synonym="TNF-R75"
                     /gene_synonym="TNFBR"
                     /gene_synonym="TNFR80"
                     /codon_start=1
                     /product="tumor necrosis factor receptor superfamily,
                     member 1B"
                     /protein_id="AAH52977.1"
                     /db_xref="GeneID:7133"
                     /db_xref="HGNC:HGNC:11917"
                     /db_xref="MIM:191191"
                     /translation="MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLRE
                     YYDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSS
                     DQVETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVV
                     CKPCAPGTFSNTTSSTDICRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQ
                     PVSTRSQHTQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLII
                     GVVNCVIMTQVKKKPLCLQREAKVPHLPADKARGTQGPEQQHLLITAPSSSSSSLESS
                     ASALDRRAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSD
                     HSSQCSSQASSTMGDTDSSPSESPKDEQVPFSKEECAFRSQLETPETLLGSTEEKPLP
                     LGVPDAGMKPS"
BASE COUNT          791 a         1098 c         1085 g          718 t
ORIGIN      
        1 gagcgcagcg gagcctggag agaaggcgct gggctgcgag ggcgcgaggg cgcgagggca
       61 gggggcaacc ggaccccgcc cgcacccatg gcgcccgtcg ccgtctgggc cgcgctggcc
      121 gtcggactgg agctctgggc tgcggcgcac gccttgcccg cccaggtggc atttacaccc
      181 tacgccccgg agcccgggag cacatgccgg ctcagagaat actatgacca gacagctcag
      241 atgtgctgca gcaaatgctc gccgggccaa catgcaaaag tcttctgtac caagacctcg
      301 gacaccgtgt gtgactcctg tgaggacagc acatacaccc agctctggaa ctgggttccc
      361 gagtgcttga gctgtggctc ccgctgtagc tctgaccagg tggaaactca agcctgcact
      421 cgggaacaga accgcatctg cacctgcagg cccggctggt actgcgcgct gagcaagcag
      481 gaggggtgcc ggctgtgcgc gccgctgcgc aagtgccgcc cgggcttcgg cgtggccaga
      541 ccaggaactg aaacatcaga cgtggtgtgc aagccctgtg ccccggggac gttctccaac
      601 acgacttcat ccacggatat ttgcaggccc caccagatct gtaacgtggt ggccatccct
      661 gggaatgcaa gcatggatgc agtctgcacg tccacgtccc ccacccggag tatggcccca
      721 ggggcagtac acttacccca gccagtgtcc acacgatccc aacacacgca gccaactcca
      781 gaacccagca ctgctccaag cacctccttc ctgctcccaa tgggccccag ccccccagct
      841 gaagggagca ctggcgactt cgctcttcca gttggactga ttgtgggtgt gacagccttg
      901 ggtctactaa taataggagt ggtgaactgt gtcatcatga cccaggtgaa aaagaagccc
      961 ttgtgcctgc agagagaagc caaggtgcct cacttgcctg ccgataaggc ccggggtaca
     1021 cagggccccg agcagcagca cctgctgatc acagcgccga gctccagcag cagctccctg
     1081 gagagctcgg ccagtgcgtt ggacagaagg gcgcccactc ggaaccagcc acaggcacca
     1141 ggcgtggagg ccagtggggc cggggaggcc cgggccagca ccgggagctc agattcttcc
     1201 cctggtggcc atgggaccca ggtcaatgtc acctgcatcg tgaacgtctg tagcagctct
     1261 gaccacagct cacagtgctc ctcccaagcc agctccacaa tgggagacac agattccagc
     1321 ccctcggagt ccccgaagga cgagcaggtc cccttctcca aggaggaatg tgcctttcgg
     1381 tcacagctgg agacgccaga gaccctgctg gggagcaccg aagagaagcc cctgcccctt
     1441 ggagtgcctg atgctgggat gaagcccagt taaccaggcc ggtgtgggct gtgtcgtagc
     1501 caaggtgggc tgagccctgg caggatgacc ctgcgaaggg gccctggtcc ttccaggccc
     1561 ccaccactag gactctgagg ctctttctgg gccaagttcc tctagtgccc tccacagccg
     1621 cagcctccct ctgacctgca ggccaggagc agaggcagcg agttgtggaa agcctctgct
     1681 gccatggtgt gtccctctcg gaaggctggc tgggcatgga cgttcggggc atgctggggc
     1741 aagtccctga ctctctgtga cctgccccgc ccagctgcac ctgccagcct ggcttctgga
     1801 gcccttgggt tttttgtttg tttgtttgtt tgtttgtttg tttctccccc tgggctctgc
     1861 cccagctctg gcttccagaa aaccccagca tccttttctg cagaggggct ttctggagag
     1921 gagggatgct gcctgagtca cccatgaaga caggacagtg cttcagcctg aggctgagac
     1981 tgcgggatgg tcctggggct ctgtgcaggg aggaggtggc agccctgtag ggaacggggt
     2041 ccttcaagtt agctcaggag gcttggaaag catcacctca ggccaggtgc agtggctcac
     2101 gcctatgatc ccagcacttt gggaggctga ggcgggtgga tcacctgagg ttaggagttc
     2161 gagaccagcc tggccaacat ggtaaaaccc catctctact aaaaatacag aaattagccg
     2221 ggcgtggtgg cgggcaccta tagtcccagc tactcagaag cctgaggctg ggaaatcgtt
     2281 tgaacccggg aagcggaggt tgcagggagc cgagatcacg ccactgcact ccagcctggg
     2341 cgacagagcg agagtctgtc tcaaaagaaa aaaaaaaagc accgcctcca aatgccaact
     2401 tgtccttttg taccatggtg tgaaagtcag atgcccagag ggcccaggca ggccaccata
     2461 ttcagtgctg tggcctgggc aagataacgc acttctaact agaaatctgc caatttttta
     2521 aaaaagtaag taccactcag gccaacaagc caacgacaaa gccaaactct gccagccaca
     2581 tccaaccccc cacctgccat ttgcaccctc cgccttcact ccggtgtgcc tgcagccccg
     2641 cgcctccttc cttgctgtcc taggccacac catctccttt cagggaattt caggaactag
     2701 agatgactga gtcctcgtag ccatctctct actcctacct cagcctagac cctcctcctc
     2761 ccccagaggg gtgggttcct ctttaccact ccccaccttc aattcctggg ccccaaacgg
     2821 gctgccctgc cactttggta catggccagt gtgatcccaa gtgccagtct tgtgtctgcg
     2881 tctgtgttgc gtgtcgtggg tgtgtgtagc caaggtcggt aagttgaatg gcctgccttg
     2941 aagccactga agctgggatt cctccccatt agagtcagcc ttccccctcc cagggccagg
     3001 gccctgcaga ggggaaacca gtgtagcctt gcccggattc tgggaggaag caggttgagg
     3061 ggctcctgga aaggctcagt ctcaggagca tggggataaa ggagaaggca tgaaattgtc
     3121 tagcagagca ggggcagggt gataaattgt tgataaattc cactggactt gagcttggca
     3181 gctgaactat tggagggtgg gagagcccag ccattaccat ggagacaaga agggttttcc
     3241 accctggaat caagatgtca gactggctgg ctgcagtgac gtgcacctgt actcaggagg
     3301 ctgaggggag gatcactgga gcccaggagt ttgaggctgc agcgagctat gatcgcgcca
     3361 ctacactcca gcctgagcaa cagagtgaga ccctgtctct taaagaaaaa aaaaagtcag
     3421 actgctggga ctggccaggt ttctgcccac attggaccca catgaggaca tgatggagcg
     3481 cacctgcccc ctggtggaca gtcctgggag aacctcaggc ttccttggca tcacagggca
     3541 gagccgggaa gcgatgaatt tggagactct gtggggcctt ggttcccttg tgtgtgtgtg
     3601 ttgatcccaa gacaatgaaa gtttgcactg tatgctggac ggcattcctg cttatcaata
     3661 aacctgtttg ttttaaaaaa aaaaaaaaaa aa
//