LOCUS BC052683 1883 bp mRNA linear ROD 02-DEC-2006
DEFINITION Mus musculus cytotoxic T-lymphocyte-associated protein 4, mRNA
(cDNA clone MGC:60618 IMAGE:30072821), complete cds.
ACCESSION BC052683
VERSION BC052683.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1883)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1883)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-MAY-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Drs. Dennis Taub, Dan Longo (NIA, USA),
Jonathan Keller (NCI, USA)
cDNA Library Preparation: Yulan Piao and Minoru Ko (National
Institute on Aging, NIH: http://lgsun.grc.nia.nih.gov/cDNA/)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 112 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31981846.
FEATURES Location/Qualifiers
source 1..1883
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6NCr"
/db_xref="taxon:10090"
/clone="MGC:60618 IMAGE:30072821"
/tissue_type="Hematopoietic Stem Cell,
(Lin-/c-Kit-/Sca-1+), mouse, 10 wks"
/clone_lib="NIA Mouse Hematopoietic Stem Cell
(Lin-/c-Kit-/Sca-1+) cDNA Library (Long)"
/lab_host="DH10B"
/note="Vector: pSPORT1"
gene 1..1883
/gene="Ctla4"
/gene_synonym="Ly-56"
/db_xref="GeneID:12477"
/db_xref="MGI:MGI:88556"
CDS 67..738
/gene="Ctla4"
/gene_synonym="Ly-56"
/codon_start=1
/product="cytotoxic T-lymphocyte-associated protein 4"
/protein_id="AAH52683.1"
/db_xref="GeneID:12477"
/db_xref="MGI:MGI:88556"
/translation="MACLGLRRYKAQLQLPSRTWPFVALLTLLFIPVFSEAIQVTQPS
VVLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPF
CSGTFNESRVNLTIQGLRAVDTGLYLCKVELMYPPPYFVGMGNGTRIYVIDPEPCPDS
DFLLWILVAVSLGLFFYSFLVTAVSLSKMLKKRSPLTTGVYVKMPPTEPECEKQFQPY
FIPIN"
BASE COUNT 533 a 375 c 414 g 561 t
ORIGIN
1 aagaggtaat cccctgttgg gttttactct gctccctgag gacctcagca catttgcccc
61 ccagccatgg cttgtcttgg actccggagg tacaaagctc aactgcagct gccttctagg
121 acttggcctt ttgtagccct gctcactctt cttttcatcc cagtcttctc tgaagccata
181 caggtgaccc aaccttcagt ggtgttggct agcagccatg gtgtcgccag ctttccatgt
241 gaatattcac catcacacaa cactgatgag gtccgggtga ctgtgctgcg gcagacaaat
301 gaccaaatga ctgaggtctg tgccacgaca ttcacagaga agaatacagt gggcttccta
361 gattacccct tctgcagtgg tacctttaat gaaagcagag tgaacctcac catccaagga
421 ctgagagctg ttgacacggg actgtacctc tgcaaggtgg aactcatgta cccaccgcca
481 tactttgtgg gcatgggcaa cgggacgcgg atttatgtca ttgatccaga accatgcccg
541 gattctgact tcctcctttg gatccttgtc gcagttagct tggggttgtt tttttacagt
601 ttcctggtca ctgctgtttc tttgagcaag atgctaaaga aaagaagtcc tcttacaaca
661 ggggtctatg tgaaaatgcc cccaacagag ccagaatgtg aaaagcaatt tcagccttat
721 tttattccca tcaactgaaa ggccgtttat gaagaagaag gagcatactt cagtctctaa
781 aagctgaggc aatttcaact ttccttttct ctccagctat ttttacctgt ttgtatattt
841 taaggagagt atgcctctct ttaatagaaa gctggatgca aaattccaat taagcatact
901 acaatttaaa gctaaggagc atgaacagag agctgggata tttctgttgt gtcagaacca
961 ttttactaaa agcatcactt ggaagcagca taaggatata gcattatggt gtggggtcaa
1021 gggaacatta gggaatggca cagcccaaag aaaggaaggg ggtgaaggaa gagattatat
1081 tgtacacatc ttgtatttac ctgagagatg tttatgactt aaataatttt taaatttttc
1141 atgctgttat tttctttaac aatgtataat tacacgaagg tttaaacatt tattcacaga
1201 gctatgtgac atagccagtg gttccaaagg ttgtagtgtt ccaagatgta tttttaagta
1261 atattgtaca tgggtgtttc atgtgctgtt gtgtatttgc tggtggtttg aatataaaca
1321 ctatgtatca gtgtcgtccc acagtgggtc ctggggaggt ttggctgggg agcttaggac
1381 actaatccat caggttggac tcgaggtcct gcaccaactg gcttggaaac tagatgaggc
1441 tgtcacaggg ctcagttgca taaaccgatg gtgatggagc gtaaactggg tctttacact
1501 cattttattt tttgtttctg cttttgtttt cttcaatgat ttgcaaggaa accaaaagct
1561 ggcagtgttt gtatgaacct gacagaacac tgtcttcaag gaaatgcctc attcctgaga
1621 ccagtaggtt tgttttttta ggaagttcca atactaggac cccctacaag tactatggct
1681 cctcgaaaac acaaagttaa tgccacagga agcagcagat ggtaggatgg gatgcacaag
1741 agttcctgaa aactaacact gttagtgttt tttttttaac tcaatatttt ccatgaaaat
1801 gcaaccacat gtataatatt tttaattaaa taaaagtttc ttgtgattgt ttaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaa
//