LOCUS BC051699 4138 bp mRNA linear HUM 17-JUL-2007 DEFINITION Homo sapiens POU class 3 homeobox 2, mRNA (cDNA clone MGC:26417 IMAGE:4817001), complete cds. ACCESSION BC051699 VERSION BC051699.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4138) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4138) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAY-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: n Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51702520. FEATURES Location/Qualifiers source 1..4138 /db_xref="H-InvDB:HIT000099360" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26417 IMAGE:4817001" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4138 /gene="POU3F2" /gene_synonym="BRN2" /gene_synonym="OCT7" /gene_synonym="POUF3" /db_xref="GeneID:5454" /db_xref="HGNC:HGNC:9215" /db_xref="MIM:600494" CDS 140..1471 /gene="POU3F2" /gene_synonym="BRN2" /gene_synonym="OCT7" /gene_synonym="POUF3" /codon_start=1 /product="POU class 3 homeobox 2" /protein_id="AAH51699.2" /db_xref="GeneID:5454" /db_xref="HGNC:HGNC:9215" /db_xref="MIM:600494" /translation="MATAASNHYSLLTSSASIVHAEPPGGMQQGAGGYREAQSLVQGD YGALQSNGHPLSHAHQWITALSHGGGGGGGGGGGGGGGGGGGGGDGSPWSTSPLGQPD IKPSVVVQQGGRGDELHGPGALQQQHQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAAN HHPGPGAWRSAAAAAHLPPSMGASNGGLLYSQPSFTVNGMLGAGGQSAGLHHHGLRDA HDEPHHADHHPHPHSHPHQQPPPPPPPQGPPGHPGAHHDPHSDEDTPTSDDLEQFAKQ FKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEE ADSSSGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ LEKEVVRVWFCNRRQKEKRMTPPGGTLPGAEDVYGGSRDTPPHHGVQTPVQ" BASE COUNT 1176 a 946 c 1013 g 1003 t ORIGIN 1 ggagcgggcg tcggagctgc ccgctgtggg agagagagga gacagaaaga gcgagcgagg 61 agagggagcc cgaggcgaaa aagtaactgt caaatgcgcg gctcctttaa ccggagcgct 121 cagtccggct ccgagagtca tggcgaccgc agcgtctaac cactacagcc tgctcacctc 181 cagcgcctcc atcgtgcacg ccgagccgcc cggcggcatg cagcagggcg cggggggcta 241 ccgcgaagcg cagagcctgg tgcagggcga ctacggcgct ctgcagagca acggacaccc 301 gctcagccac gctcaccagt ggatcacagc gctgtcccac ggcggcggcg gcgggggcgg 361 tggcggcggc ggggggggcg ggggcggcgg cgggggcggc ggcgacggct ccccgtggtc 421 caccagcccc ctgggccagc cggacatcaa gccctcggtg gtggtgcagc agggcggccg 481 cggagacgag ctgcacgggc caggcgccct gcagcagcag catcagcagc agcaacagca 541 acagcagcag caacagcagc aacagcagca gcagcagcag caacagcggc cgccgcatct 601 ggtgcaccac gccgctaacc accacccggg acccggggca tggcggagcg cggcggctgc 661 agcgcacctc ccaccctcca tgggagcgtc caacggcggc ttgctctact cgcagcccag 721 cttcacggtg aacggcatgc tgggcgccgg cgggcagtcg gccgggctgc accaccacgg 781 cctgcgggac gcgcacgacg agccacacca tgccgaccac cacccgcacc cgcactcgca 841 cccacaccag cagccgccgc ccccgccgcc cccgcagggt ccgcctggcc acccaggcgc 901 gcaccacgac ccgcactcgg acgaggacac gccgacctcg gacgacctgg agcagttcgc 961 caagcagttc aagcagcggc ggatcaaact gggatttaca caagcggacg tggggctggc 1021 tctgggcacc ctgtatggca acgtgttctc gcagaccacc atctgcaggt ttgaggccct 1081 gcagctgagc ttcaagaaca tgtgcaagct gaagcctttg ttgaacaagt ggttggagga 1141 ggcggactcg tcctcgggca gccccacgag catagacaag atcgcagcgc aagggcgcaa 1201 gcggaaaaag cggacctcca tcgaggtgag cgtcaagggg gctctggaga gccatttcct 1261 caaatgcccc aagccctcgg cccaggagat cacctccctc gcggacagct tacagctgga 1321 gaaggaggtg gtgagagttt ggttttgtaa caggagacag aaagagaaaa ggatgacccc 1381 tcccggaggg actctgccgg gcgccgagga tgtgtacggg gggagtaggg acactccacc 1441 acaccacggg gtgcagacgc ccgtccagtg aactcgagct gggggagggg cagagcgcgg 1501 ggctccccct ccccttcggt ccttggccct ttcccggccc tcttgttccc tctctaactt 1561 ctgattgttc ttttattttt aattattatt tccccgtccc ttaaaaagac aaaaaaaata 1621 aggcaaaagg aaagcaacta agacactgga ctatccttta aaggtagcag gtgtaatgat 1681 gtgttttgac ctttgcaggc gagtaaccag gcaatggagt ggagtgtctc ctggagagag 1741 tgaggagagt gtgtgatagc tagaaagaga gagagacaga gagatggcaa gcactgagat 1801 aaatacctgg caaaactaaa taaattacca aaaaggaaaa aaaatccacc aaaccatgat 1861 aaacacaaaa tgcagcttcc tgatgcttag agttggcaca tgctgctgtg tttatttatt 1921 gtggattccc atcaggaaag aggaaaaata cacatgttct ttcatatagg caaaatttaa 1981 ccacataaat ttgcactgca agaaaattga agtttacgtg aacaaattca tgagcatatt 2041 ttctctttct ccgcaccgtt aatttgggag ttgccgtttt gggggatttt gttttgcttt 2101 gctttattca tcggagagag ttgaagccag ctcttggcca ctctccattt ctaatgttct 2161 tgtgttgccc cttcttcgta ctgtttgtga actttggtta ccttcacatt ccccttacga 2221 gggtgtaaca tctatttgtt cctcttacca aagcaaaagg attggcttca tacaaaatag 2281 acaattctct gatttcagga aatgtgcatg gtctacccgc tttatcgaag gcaagaatcc 2341 ggtttggaat ataaaaataa gcattggttg ttcttaccag ccacaaagta aacttcattt 2401 tcaggcagtg tttctggggg aggttatgga gggaagaaaa aagaaaaatc gatagtgagt 2461 gactgattgc ttcattttat caggcgggcc gattgtgaaa gagctcaggg gaaatgtgga 2521 ggttaaatat atttccagag ttgtccagca gaaagaaagt ggcactttga agagaactag 2581 ggaagtacat atcttcagat atccctatat agttctctac cttcagtttt agtaacaatt 2641 atgaagaatt atttgtgctg acagcagcag ttaaactttg tttctctaat agcttttttt 2701 ttacataaaa aaagacccag gaacttaata gtgtatgcat aagactgtgt tttttagcac 2761 acagataccc acagcataca ctgacgatct ccacgcagta gacaggtttt gtcttcacta 2821 gctcatttgt ttatcaagtc atatttaggg tcccacaccc tcttttcctg taatttattg 2881 cagaatacac cactttgact tggacagctt tctgccccct ctttcactaa ggaaggcaaa 2941 tgaagtgaaa aaaaaaatgc cattttcaat ccttcctttc tcccctttgt taatagtttt 3001 aagtgaattt tgaccttatc ttaatggaaa acggttaact ccaaacacaa aagactctac 3061 tggaaagtgt aggtgaaaaa acttgtaact gtattgaaaa taaataccat taaactgtga 3121 tcagttaaaa tttaaaagaa aaatcagcac aaaagggcgc taaaagggaa aacacttttt 3181 attaatctta aaagtttggg ggtttttttc cagttaggta ttagataaat ttttatttta 3241 aaaaatgaaa gtctcactac cataaaatta tggttcagca tcagattagc attgcactca 3301 gtagtcttta aggttttagg aaatatgctt tatattgtct tttcaaacac ctgtgattgt 3361 ttcattttcc atgtttttgc aagataaatg gtgacttata atgggcatat ttatttgcct 3421 gtatttcatt tcccccaatg aatgtcacaa ggagatgggc acggagctgc ttcgggtgca 3481 tcacgctgct cgttcctgag gtatgggaac tggcctttag tgaagctatc cagagcaggg 3541 caaatagcca ctggtaaagg gaggaaatga atttccagat acttattacc aagtaggtaa 3601 ggtcagaagc tggagttcag agaatgtgtc tacagcttct ctgactctta taggtttact 3661 aagatgaaag ttaccactga accttaccac tatgtatata tgtttaatat ctgtcttttg 3721 aaatgcagaa atagtttaaa tgtttctttg tctatttttc ttttttttta atgctaccca 3781 gggaaatatt ttcatatcat ttttaagtgg cctgcctcaa tgtatattta tttcttttga 3841 aacaaaaagg ttctggaaac tgtttttctg tagctttaaa tgaataggtg agcaaaatct 3901 atatgggatg taattttttt gttcagtctc ttaaaaaata ctttgttttg gtacatttgg 3961 ttgtgcttgt ggggaaaata aaaacgcaga gatccttata tatttatgtt aaagtaatat 4021 tttattatct acataaaaca gaaatgcaca ataaaaaaaa aaaaaaaaaa aaaaaaaaaa 4081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //