LOCUS BC051360 4272 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens RAB11 family interacting protein 3 (class II), mRNA (cDNA clone MGC:59778 IMAGE:6646253), complete cds. ACCESSION BC051360 VERSION BC051360.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4272) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4272) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 47 Row: o Column: 24. FEATURES Location/Qualifiers source 1..4272 /db_xref="H-InvDB:HIT000053639" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:59778 IMAGE:6646253" /tissue_type="Ovary, teratocarcinoma" /clone_lib="NIH_MGC_109" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..4272 /gene="RAB11FIP3" /gene_synonym="KIAA0665" /gene_synonym="Rab11-FIP3" /db_xref="GeneID:9727" /db_xref="HGNC:HGNC:17224" /db_xref="MIM:608738" CDS 339..2609 /gene="RAB11FIP3" /gene_synonym="KIAA0665" /gene_synonym="Rab11-FIP3" /codon_start=1 /product="RAB11 family interacting protein 3 (class II)" /protein_id="AAH51360.1" /db_xref="GeneID:9727" /db_xref="HGNC:HGNC:17224" /db_xref="MIM:608738" /translation="MASAPPASPPGSEPPGPDPEPGGPDGPGAAQLAPGPAELRLGAP VGGPDPQSPGLDEPAPGAAADGGARWSAGPAPGLEGGPRDPGPSAPPPRSGPRGQLAS PDAPGPGPRSEAPLPELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHRARGEVDV FSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVFDALDGDG DGFVRIEDFIQFATVYGAEQVKDLTKYLDPSGLGVISFEDFYQGITAIRNGDPDGQCY GGVASAQDEEPLACPDEFDDFVTYEANEVTDSAYMGSESTYSECETFTDEDTSTLVHP ELQPEGDADSAGGSAVPSECLDAMEEPDHGALLLLPGRPHPHGQSVITVIGGEEHFED YGEGSEAELSPETLCNGQLGCSDPAFLTPSPTKRLSSKKVARYLHQSGALTMEALEDP SPELMEGPEEDIADKVVFLERRVLELEKDTAATGEQHSRLRQENLQLVHRANALEEQL KEQELRACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTPCLK ANIERLEEEKQKLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIED LRKQLEHLQLLKLEAEQRRGRSSSMGLQEYHSRARESELEQEVRRLKQDNRNLKEQNE ELNGQIITLSIQGAKSLFSTAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDR IIVAIMETNPSILEVK" BASE COUNT 836 a 1365 c 1398 g 673 t ORIGIN 1 tcctgcttca caggctccgc ggcctccggc ctcctcggcc cccgtccccc ggcctcctcg 61 gcccccgtcc cccgccatcc gccgcccgga tcctcgccgc cctccctagg ccgccccgcc 121 gccatgggcc tgcgcccgcc gcgccgccgg gccgagggca gctgaggcgc ggtgcgaaga 181 tgggcgagga cagagcaggg cccgagcgcc agccccagca gcccgggcgc cccgcgcgcg 241 cccgcccgcg ccgccgaggg gatgcccgcg cccgccgccg cgccctgagc gcctttgtct 301 gccgcccgcg ccctccgcac cactagcctc tcgggagcat ggcgtcggcc ccgccggcct 361 cgcccccggg ctcggagccg ccggggcccg acccggagcc gggcgggccg gacgggccgg 421 gggcggcgca actggctccg ggccctgcgg agctacgcct cggagcgccc gtcggcggcc 481 ccgacccgca gtccccgggc ctggatgagc ctgcgcccgg ggccgctgca gatggcgggg 541 cgcgttggag cgccgggccg gccccggggc tggagggagg cccgcgagac cccgggccgt 601 ccgccccgcc gccgcgctcc ggcccgcggg ggcagcttgc gagccccgac gccccgggcc 661 cagggccgcg ctccgaagcg ccgcttccag aactcgaccc gttgttctcc tggactgagg 721 agcccgagga gtgtggcccc gcgagctgcc cggagagcgc gcctttccgc ttgcaggggt 781 ccagcagcag ccaccgagcg cggggcgagg tcgacgtctt ctctcccttc cccgcgccca 841 cggcgggcga gctggcgctg gagcaaggtc ccgggtcccc gccgcagccc tcggacctca 901 gccagaccca cccccttccg agcgagcccg tggggagtca ggaggacggc ccccgcctcc 961 gagccgtgtt cgatgccctg gacggggatg gggacggttt cgtccgcatc gaggacttca 1021 tccagtttgc tacggtctac ggggcagagc aggtgaagga cttaactaag tacttggatc 1081 ccagtgggct cggcgtgatc agctttgaag acttctacca agggatcaca gccatcagaa 1141 acggagatcc tgatggccag tgctacggtg gtgtcgcttc tgcccaagat gaggagcccc 1201 tggcctgccc ggacgagttc gatgacttcg tcacctatga ggccaacgag gtgacggaca 1261 gcgcgtacat gggctccgag agcacctaca gtgagtgtga gaccttcacg gacgaggaca 1321 ccagcaccct ggtgcaccct gagctgcaac ctgaagggga cgcagacagt gccggcggct 1381 cggccgtgcc ctctgagtgc ctggacgcca tggaggagcc cgaccatggt gccctgctgc 1441 tgctcccagg caggcctcac ccccatggcc agtctgtcat cacggtgatc gggggcgagg 1501 agcactttga ggactacggt gaaggcagtg aggcggagct gtccccagag accctatgca 1561 acgggcagct gggctgcagt gaccccgctt tcctcacgcc cagtccgaca aagcggctct 1621 ccagcaagaa ggtggcaagg tacctgcacc agtcaggggc cctgaccatg gaggccctgg 1681 aggacccttc ccccgagctc atggagggcc cagaggagga cattgctgac aaggttgtct 1741 tcctggaaag gcgtgtgctg gagctggaaa aggacacggc agccaccggt gagcaacaca 1801 gccgcctgag gcaggagaac ctgcagctgg tgcacagagc aaacgccctg gaggagcagc 1861 tgaaggagca ggagctgaga gcctgcgaga tggtcctgga agagacccgg cgtcagaagg 1921 agctcctgtg caagatggag agggagaaga gcattgagat cgagaacctg cagaccaggc 1981 tacagcaact ggacgaggag aacagtgaac tccggtcctg cacgccctgt ctgaaggcca 2041 acattgagcg tctggaggag gagaagcaga agctgttgga tgagatagag tcgctgacgc 2101 tgcggctcag tgaagagcag gagaacaaga ggagaatggg ggacaggctg agtcacgaga 2161 ggcaccagtt ccagagggac aaggaggcca cccaggagct gatcgaggac ctccgaaagc 2221 agctggagca cctgcagctc ctcaagctgg aggccgagca gcggcggggc cgcagcagca 2281 gcatgggcct gcaggagtac cacagccgcg cccgggagag cgagctggag caggaggtcc 2341 gcaggctgaa gcaggacaac cgcaacctga aggagcagaa cgaggagctg aacgggcaga 2401 tcattaccct cagcatccag ggcgccaaga gcctcttctc cacagccttc tctgagtccc 2461 tggctgcaga gatcagctcc gtctcccgag atgagctcat ggaggcgatt cagaagcagg 2521 aggagatcaa cttccgcctg caggactaca tcgacaggat catcgtggcc atcatggaga 2581 ccaacccgtc catcctggag gtcaagtaga ggcaggaagg tccagcctga gctggattcg 2641 ggactccaac accctggagt ggttccgtca gaccatgagg agccaagacc agcaggtccc 2701 acagccgaca gtgcccagag catgcaggga accctcgtgc agctgagctg gggccgccaa 2761 agaccggggc tgccaaaggg gcagagggtg gtggagagga gagggagaaa gggaagtccc 2821 agggcccggg gtccacagag gatgagggtt gtggcagggc cgtccatcag cgctgacctt 2881 ccgggggccc agagcttccc agccctgagt caagctggcc atgaacgcgt acacttcagt 2941 tcagcaggat gggctggaga gcctctctgt gcagcggtgt ggggtgagcc ctgctgtggc 3001 ctccttgtgg tggtccctct tcccacgtgc agccctgttg ggaagaaagg aagaaaacag 3061 gtccctccag gggtgctgct gcctaagcca cccacataag tacgctggtg ccgtgtcacc 3121 catgttgagc cgctcctgat ggctgacggg ctcccagacc ctcacctcgg acatggtggt 3181 gggggaagga cgggtgggca aggctggtgc gttccccagc tctccctacg ctgctcgggc 3241 cattgcccag ccagatgtgg tcacctcagt ccagctctgg ggcctccagg ccatgtggct 3301 gttcccacgg cccagtcctc gctgcagtaa cccctggggg ctctgaccac ctatgggggc 3361 cgggcaggag cctctggggc ctccactccg acatcaggac ctgagatgac cgctgtgtgg 3421 cgctctctcc ctgggcaggg tggatgccac aggcccctct ggctcccagg tgctgcttct 3481 ccacaggtgc ggcctggccc ggcctcctaa aggccacacc ctccccacgc acttcccagg 3541 ccagaatcca aacatcggga accctgtttt cttctgggtg tgtctcactt agaaatcgtg 3601 gttcttcccc gagggtgcat gttgcaggag ggagagggca gggaagactc acagcagagc 3661 aggagggggc ctgtgcttct cggggtctgc accccaggca cagcggtgtc accccgcagg 3721 accgcgggcc tgccccaacc cccagcattc ccgggtgggc ccagacccca tcaccaagac 3781 tggccacccg ctgcgtgtgt gtgcgcgcgc gtgtacgtgt ggccccacat ccgccgcctt 3841 ccacgctagg atgtaagagg tcgcctccta ttgtacattt ggggaaagcc ttgggtgtaa 3901 atcagtgtaa acttggagga gagatttttc tatcatgtag agtaggtatt ttttatagat 3961 tgaaggttga tcaatttttt aatactttca agagaaaact gtgtatacac atgaaatata 4021 tatatatata tatatatata tatgtataat atataaagac tggcaccctg cctctctgtg 4081 cccaggccca gccctggtga catggcacca ctcagcagtg ctgtcactgt aagcatggac 4141 tcccaggaga cagtgtggga aacgctcctg ctttaattcc ccgagaaacg gctcttcctg 4201 cctggatgca ggagggcagg ggccaccaca gattaaagct gttactgcac aaaaaaaaaa 4261 aaaaaaaaaa aa //