LOCUS BC050096 3165 bp mRNA linear HTC 29-AUG-2005
DEFINITION Homo sapiens solute carrier family 35, member F5, mRNA (cDNA clone
IMAGE:4824762), with apparent retained intron.
ACCESSION BC050096
VERSION BC050096.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3165)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-APR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: k Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361958
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3165
/db_xref="H-InvDB:HIT000099121"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4824762"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 867 a 642 c 733 g 923 t
ORIGIN
1 gggggcgggg ccgcgcggag ggcaagccgg gggcggggcc ggggccagag cagatctccg
61 ggcctccgcg gccatagctg actgtgccgt cccttcccct cacccgctcc acgccctcct
121 gggccgagtg gagttgggtg gtgtcgggag cctctccctg aggggcaccg cgtcttcagg
181 agctgggcct ccagtgcggc gcgatgtcag gcgcggtgac agctctgtga gtccgaggcc
241 gcggccgtgg cgctgggcgg ctgcggggcc tgaccggtcc gctcatggtg ccgccacgac
301 gccatcgcgg ggcaggaagg ccaggtaggc aggcagggaa gggccccgac atcaccggag
361 cccaaaccgg gacggagtgc ccaccagcag caccacctcc tgccctcggt ggcagcagga
421 gcgccttgac cgaaaccgtg aaggtctcta ggggcggagg gagcgggagc tgacaggggc
481 gcccgagccc tgcgcccacc gctggcaatt gaggaagccg tgcgtgcgcc ctcgcctcgg
541 ctccccgggg aggcgtcgct gccttaactg tcttccccgc tccaaaacag aaggatgatt
601 tcttttccca gctgtttctt ttaaaatgac tggatgtttt gatagaggtg ggtggaggag
661 catggagaat ccttttcttt taccacttga agagattgga aaggtgcctt caagacccac
721 agcaaatcac ttactctccg ataaccaaat tccactccag cagatcaggg acagaaaaga
781 cacttttaga aacagtgtct agacgctgtc cccagggatg gattcctctg gatggagagg
841 ggtgctgagt tcttcacctc cttttagact gagatctgcc aagttttccg gcattgctct
901 tgaggatctc agaagggctc ttaagacaag actgcaaatg gtgtgtgtat ttgtcatgaa
961 ccgaatgaat tcccagaaca gtggtttcac tcagcgcagg cgaatggctc ttgggattgt
1021 tattcttctg cttgttgatg tgatatgggt tgcttcctct gaacttactt cgtatgtttt
1081 tacccagtac aacaaaccat tcttcagcac ctttgcaaaa acatctatgt ttgttttgta
1141 ccttttgggc tttattattt ggaagccatg gagacaacag tgtacaagag gacttcgcgg
1201 aaagcatgct gctttttttg cagatgctga aggttacttt gctgcttgca caacagatac
1261 aactatgaat agttctttga gtgaacctct gtatgtgcct gtgaaattcc atgatcttcc
1321 aagtgaaaaa cctgagagca caaacattga tactgaaaaa acccccaaaa agtctcgtgt
1381 gaggttcagt aatatcatgg agattcgaca gcttccgtca agtcatgcat tggaagcaaa
1441 gttgtctcgc atgtcatatc ctgtgaaaga acaagaatcc atactgaaaa ctgtggggaa
1501 acttactgca actcaagtag cgaaaattag cttttttttt tgctttgtgt ggtttttggc
1561 aaatttgtca tatcaagaag cactttcaga cacacaagtt gctatagtta atattttatc
1621 ttcaacttcc ggacttttta ccttaatcct tgctgcagta tttccaagta acagtggaga
1681 tagatttacc ctttctaaac tattagctgt aattttaagc attggaggcg ttgtactggt
1741 aaacctggca gggtctgaaa aacctgctgg aagagacaca gtaggttcca tttggtctct
1801 tgctggagcc atgctctatg ctgtctatat tgttatgatt aagagaaaag tagatagaga
1861 agacaagttg gatattccaa tgttctttgg ttttgtaggt ttgtttaatc tgctgctctt
1921 atggccaggt ttctttttac ttcattatac tggatttgag gacttcgagt ttcccaataa
1981 agtagtatta atgtgcatta tcattaatgg ccttattgga acagtactct cagagttcct
2041 gtggttgtgg ggctgctttc ttacctcatc attgataggc acacttgcac taagccttac
2101 aatacctctg tccataatag ctgacatgtg tatgcaaaag gtgcagtttt cttggttatt
2161 ttttgcagga gctatccctg tatttttttc attttttatt gtaactctcc tatgccatta
2221 taataattgg gatcctgtga tggtgggaat cagaagaata tttgctttta tatgcagaaa
2281 acatcgaatt cagagagttc cagaagacag cgaacagtgt gagagtctca tttctatgca
2341 cagtgtttct caggaggatg gagctagtta gctgtctgtt gtctgtagcc cagcttgata
2401 atggaactat acagcgaaga gacaatctct gcactttgct atgtagctgt gtacatatca
2461 ctacagttat aggaagtttc agtctacagt ccatccaaag gaccaacctg ccttacacat
2521 ctcaaggaat tcagctgttg aaatcatttg aactaatcaa ggaataaatc ctaatgttct
2581 gggactttat tttcacatgt taaatgctgg aatatattat gaaaatgttt tcaagaaatc
2641 acttaagtgt tcatagacca gtatttctga caggtaaaat gctaaaataa gctacctgta
2701 ataagtgtgg attatatttt tgggttttgt agaatattgc aaattaacca cacaaaaaat
2761 gtttaattta tgcaacaagc atgtttgtgc aaatttcatg ggactttaaa aagaataagt
2821 atttgagaaa atatctggtt cacttacact acatttactg tattattctt ttatagcatt
2881 aggtgccttg tattttaaat ctgtgacaaa ccatggcaaa tttttaaagg ggaagtatta
2941 ttataaaatg aagaaatatg tatttctaaa ggctatattg ctgtaaactt aattgataaa
3001 gctctgttta atttagagtt ttgaagaaat agtctccctt caattaagaa attttcataa
3061 tggaatgatt taaattgaag tgacaaagag tattattaaa atacaatgtt tatacgtcta
3121 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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