LOCUS BC048421 1570 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens chondroadherin-like, mRNA (cDNA clone IMAGE:4815408),
partial cds.
ACCESSION BC048421
VERSION BC048421.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1570)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1570)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 106 Row: c Column: 2.
FEATURES Location/Qualifiers
source 1..1570
/db_xref="H-InvDB:HIT000099001"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4815408"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1570
/gene="CHADL"
/gene_synonym="SLRR4B"
/db_xref="GeneID:150356"
/db_xref="HGNC:HGNC:25165"
CDS <1..1362
/gene="CHADL"
/gene_synonym="SLRR4B"
/codon_start=1
/product="CHADL protein"
/protein_id="AAH48421.1"
/db_xref="GeneID:150356"
/db_xref="HGNC:HGNC:25165"
/translation="NPLWCGCQARPLLEWLARARVRSDGACQGPRRLRGEALDALRPW
DLRCPGDAAQEEEELEERAVAGPRAPPRGPPRGPGEERAVAPCPRACVCVPESRHSSC
EGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGAL
AGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNSFLQVPGAALRALPSLFSLH
LQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVP
TGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGP
GLQSLHLQKNQLRALPALPSLSQLELIDLSSNPFHCDCQLLPLHRWLTGLNLRVGATC
ATPPNARGQRVKAAAAVFEDCPGWAARKAKRTPASRPSARRTPIKGRQCGADKVGKEK
GRL"
BASE COUNT 247 a 539 c 527 g 257 t
ORIGIN
1 aatccgctgt ggtgcggctg ccaggcgcgg cccctactcg agtggctggc gcgggcgcgc
61 gtgcgctcgg acggcgcgtg ccaggggccg cggcgcctgc ggggcgaggc tctggacgcc
121 ctgcggccct gggacctgcg ctgccctggg gacgcggcgc aggaagagga agagctggaa
181 gagcgggctg tggccgggcc ccgcgcccct ccgcgcggcc ctccgcgcgg ccccggggag
241 gagcgggcag tcgcgccttg ccctcgcgcc tgcgtgtgcg tccccgagtc ccggcacagc
301 agctgcgagg gctgcggcct gcaggcggtg ccccgcggct tccccagcga cacccagctc
361 ctggacctga ggcggaacca cttcccctcg gtgccccgag cggccttccc cggcctgggc
421 cacctggtgt cgctgcacct gcagcactgc ggcatcgcgg agctggaagc gggcgccctg
481 gccgggctgg gccgcctgat ctacctgtac ctctccgaca accagctcgc aggcctcagc
541 gctgctgccc ttgaaggggc tccccgcctc ggctacctgt acctagaacg caacagtttt
601 ctgcaggtgc caggggctgc cctgcgcgcc ctgcccagcc tcttctccct gcacctgcag
661 gacaacgctg tggaccgcct ggcacctggg gacctgggga gaacacgggc cttgcgctgg
721 gtctacctga gtggaaaccg catcaccgaa gtgtcccttg gggcgctggg cccagctcgg
781 gagctggaga agctgcacct ggacaggaat cagctgcgag aggtgcccac tggggccttg
841 gaggggctgc ctgccctcct ggagctgcag ctctcgggca acccactcag ggccttgcgt
901 gacggagcct tccagcctgt gggcaggtcg ctgcagcacc tcttcctgaa cagcagtggc
961 ctggagcaga tttgtcctgg ggccttttca ggcctggggc ccgggctcca gagcctgcac
1021 ctgcagaaga accagcttcg ggccctgcct gccctgccca gtctcagcca gctggagctc
1081 atcgacctca gcagcaatcc cttccactgt gactgccagc tgcttccgct gcacaggtgg
1141 cttactgggc tgaacctgcg ggtgggggcc acctgcgcca cccctcccaa tgcccgtggc
1201 cagagggtga aggctgcagc tgctgtcttt gaagactgcc cgggctgggc tgccagaaag
1261 gccaagcgga caccagcctc caggcccagt gccaggagaa cccccatcaa aggaagacag
1321 tgtggagcag ataaggtggg gaaggagaag ggtcgtctct gagcacggag caggctggtc
1381 ctgccttgac ccagcccggt ggctcttact ctcgccagga acaggctccg acgagatctt
1441 cctggcaccc tgagggtcgt cctccagcag gggcttcttg gacccctgtc tgaggggtcg
1501 cgtcttagtg ggcgggattc ttttcccttt gaataaaaat ggattcaaac ccagcaaaaa
1561 aaaaaaaaaa
//