LOCUS BC047729 2019 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:6196142, with apparent retained
intron.
ACCESSION BC047729
VERSION BC047729.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2019)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2019)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: m Column: 23
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2019
/db_xref="H-InvDB:HIT000098769"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6196142"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 647 a 430 c 412 g 530 t
ORIGIN
1 gaatttgagg ctttagctcg ccgggcattg catgaagatc taccttctgg gagttttatt
61 caagatgata tggtccactg ctcatatctt tgtgatgaag gcaaggactg ctgtgaccga
121 atgggaagct gcaaatgtgg gacacacaca ggccattttg agtgcatctg tgaaaagggg
181 tattacggga aaggtctgca gtatgaatgc acagctgatg tgccacataa catggacttc
241 tccggcttgt ctgcccacag cttgcccatc ggggacatac aaacctgaag gctcaccagg
301 aggaatcagc agttgcattc catgtcctga tgaaaatcac acctctccac ctggaagcac
361 atcccctgaa gactgtgtct gcagagaggg atacagggca tctggccaga cctgtgaact
421 tgtccactgc cctgccctga agcctcccga aaatggttac tttatccaaa acacttgcaa
481 caaccacttc aatgcagcct gtggggtccg atgtcaccct ggatttgatc ttgtgggaag
541 cagcatcatc ttatgtctac ccaatggttt gtggtccggt tcagagagct actgcagagg
601 tatgcaaact gccaatttac attgtttatt tactgtcttg cctgatttcc ttgatttaaa
661 ctctagtaaa ccagtcagtt cttcatttct ttttggattt catagacccc atactacaga
721 aagagaaaaa ttataggaaa tttgaaatca gaattaccaa gttcaattga ccacataatt
781 gtaaactacg ccttttatag cccttttatg aacaagcaaa gaaaaagttt gcctgggaag
841 taaatggaca ggttacccca aacctcaaat ttcaagcctc taagacatga tataaaggag
901 agtttagaat aatcagagtg gagactgatg cctcttggaa ttgtaggact taaggaatca
961 cacaagtatc ctgcaacaag agcagttagc caacttgtaa tctccagcct ttacttcggc
1021 tagtcgaccc gttatagaaa gtagagaatt tgtcaaagcg agagtccaag gagcctattc
1081 aggccaatag aaagtgggca ccaccaatgg aatctgaggc tcccatgtca aatacagaga
1141 agcaataaaa aaaaaaatag tgcctcaatc tgcctcaact tgccaactcc aggacctact
1201 ttcctacttc ttacaactgt cacacaacca acttcctagg gttttacaag tagggttaga
1261 agaggaggat atttaagaaa aggtaaaagg ggggcgagca aagggacttg aggacctcca
1321 tcagaatccc tgcccacaaa gcttctcagt acagtacctg ctccctacct acggttgcca
1381 gttgaaacac aggatgccag ttaaatttga atttttgata aataatattt tagtatatgt
1441 gggtcccctg caagatttgg aacctcctta tactaaaaaa ttatttgttg attttctgaa
1501 atttaaattt aactgggcgt gctggttcat tggtttgttt gttgctaaat ctggcaactt
1561 tactcccacc acatccacta gtcatttttt ggcagaacac tttgctgagg atttgactac
1621 tccaaaaccc cacaaatcag ctggaccact ggttaaagat tagttctgtc ttctggtctt
1681 ttcttggcat ccatatccat aagggagaac cacctactca tgactccaag atcatttgtg
1741 aatcccagga gacatctatg ttggtaccaa tttattaggt accaatactg aactcatcta
1801 taaatgtaaa ttggcctaca tggtatcccc aaaagacaag gaaaactgaa aacgatcagc
1861 agattgaaca aaagagacct gacagaaaag aaagaaaaat ggaatcactg agattcaaag
1921 gcaactacat tgctaaaata aggccaggat tccaagcaat gaaagaaatt tgagaggaaa
1981 aatatgtatt agaagtaaaa aaaaaaaaaa aaaaaaaaa
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