LOCUS       BC047564                3468 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens tripartite motif-containing 6, mRNA (cDNA clone
            MGC:48281 IMAGE:4825118), complete cds.
ACCESSION   BC047564
VERSION     BC047564.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3468)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3468)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 90 Row: g Column: 22
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 51477691.
FEATURES             Location/Qualifiers
     source          1..3468
                     /db_xref="H-InvDB:HIT000053166"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:48281 IMAGE:4825118"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..3468
                     /gene="TRIM6"
                     /gene_synonym="RNF89"
                     /db_xref="GeneID:117854"
                     /db_xref="HGNC:HGNC:16277"
                     /db_xref="MIM:607564"
     CDS             243..1793
                     /gene="TRIM6"
                     /gene_synonym="RNF89"
                     /codon_start=1
                     /product="tripartite motif-containing 6"
                     /protein_id="AAH47564.1"
                     /db_xref="GeneID:117854"
                     /db_xref="HGNC:HGNC:16277"
                     /db_xref="MIM:607564"
                     /translation="MCGSERILQAGNILEIRVGQAGARRVATMTSPVLVDIREEVTCP
                     ICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHL
                     ANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFL
                     VEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIKTEFNQL
                     RNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMEL
                     LQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLN
                     PHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKK
                     TAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSL
                     LLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIP
                     MTLRRPSS"
BASE COUNT         1005 a          709 c          791 g          963 t
ORIGIN      
        1 gccttccgca aactcctgac ctgtgggtcc atccgttcaa cggccaaagg ctggcggagg
       61 agggatcccc tgcctttctc ggaacggaac ggagcagagt cgtgcgtggt tgagtttaga
      121 taaaagccga gtgagcgcgc tctgttcctt aagattagtt taaggtgcct tggattgctc
      181 tgaagagctt tgaccacctg atattgctta catctggaac ttcttggctt ctcattcccc
      241 agatgtgcgg gtcagagagg attctacagg caggaaacat cttagaaatc agggttgggc
      301 aggcaggagc caggagagta gctacaatga cttcaccagt actggtggac atacgagaag
      361 aggtgacctg ccctatctgc ctggagctcc taacagaacc cctgagcata gactgtggcc
      421 acagcttctg ccaagcctgc atcacaccaa atggcaggga atcagtgatt ggtcaagaag
      481 gggaaagaag ctgccctgtg tgccagacca gctaccagcc agggaacctg cggcctaatc
      541 ggcatctggc caacatagtg aggcggctca gagaggtagt gttgggccct gggaagcagc
      601 tgaaagcagt tctttgtgca gaccatggag aaaaactgca gctcttctgt caggaggatg
      661 ggaaggtcat ttgctggctt tgtgagcggt ctcaggagca ccgtggtcac cacacgttcc
      721 tcgtggagga ggttgcccag gagtaccagg agaagtttca ggagtctcta aagaagctga
      781 agaacgagga gcaggaagct gagaagctaa cagcttttat cagagagaag aagacatcct
      841 ggaagaatca gatggagcct gagagatgca ggatcaagac agagtttaat cagctgcgaa
      901 atatcctaga cagagtggag caacgggagc tgaaaaagct ggaacaggaa gagaagaagg
      961 ggctacgaat tatagaagag gctgagaatg atctggtcca ccagacccag tcgctgcgag
     1021 agctcatctc ggatctggag cgtcgatgtc aggggtcaac aatggagctg ctgcaggatg
     1081 tgagtgatgt cacagaaagg agtgagttct ggaccctgag gaagccagaa gctctcccta
     1141 caaagctgag aagtatgttc cgagccccag atctgaaaag gatgctgcga gtgtgtagag
     1201 agctgacaga tgtccaaagc tactgggttg acgtgaccct gaatccacac acagctaatt
     1261 taaatcttgt cctggctaaa aaccggagac aagtgaggtt tgtgggagct aaagtatctg
     1321 gaccttcctg tctggaaaag cattatgact gtagtgtcct gggctcccag cacttctcct
     1381 ctggtaagca ttactgggag gtagatgtgg ccaagaagac tgcctggatc ctaggggtat
     1441 gcagcaattc actgggacct acattctctt tcaaccattt tgctcaaaat cacagtgctt
     1501 actccaggta tcagcctcag agtggatact gggtgattgg gttacagcat aaccatgaat
     1561 atagggccta tgaggattct tccccttccc tgcttctctc catgacagtg ccccctcgcc
     1621 gtgttggggt tttcttagat tatgaggctg gtactgtctc cttttataat gtcacaaacc
     1681 atggcttccc catctacact ttctctaaat attactttcc cactactctt tgtccatatt
     1741 ttaatccttg caactgtgta attcctatga ccctgcgtcg tccaagctct tgaatattct
     1801 tctgttccca cccacttctg ataagtaccc tgaggcttat cagcatgtga ttctcccttc
     1861 tgatcttctg tttttctgtg ttctcaattc ttttgttgtt ttttggtttt tgaatctttt
     1921 ttgagatgga atctcgctct gtcgcccagg ctggagtgca ctggcgcaat ctcggctcac
     1981 tgcaacctct gcctcctggg ttcaagcgaa cctcctgcct cagcatccca agtagctggg
     2041 attacaggca cccaccacca tgcccaacta atttttgtat ttttatagag atagggtttc
     2101 accgtgttgg ccaggctgat ctcgaactcc tgaccgcaag tgatccaccc gcctcggtct
     2161 cccaaagtgc tgggattaca gatgtgagcc gccgcgccca gacagttctt tcgttttaaa
     2221 cagttactca gtactaggat gcacccagtg gtgagagtaa gcatctttga ctgatgacag
     2281 gtcttgaggt ggataggggg cgctttcagt attttgccat taagcatagt atttgatgca
     2341 ggtttttttt gattgatgca ggggatcaaa tttaggaagt tctgatctgt taatttacta
     2401 caagtttttg tataaaatga aaactcgtat tctacctatg tcttttctgt aaattattga
     2461 gacaattgtg tatcattttt gttctgttaa tgtggcttag tacattgatt tacttcaatt
     2521 tgttaccaca acttgctgaa atacaccatt attatttgtt gtatgcaata ctggatttat
     2581 tttgataacg tattgtttag attttgttct catctatgtt aatgaaagaa attggcctgt
     2641 atttttacat tcttgtaata tctttgccag gttctataaa atgcaataat aagcaaataa
     2701 attactttgt ttttgtataa gtatgtatag gattgagctc taaaaccaaa ccattataat
     2761 gataatttgg gtagcttcaa actcaaattg aagagagtct tcactacaat cttcactaca
     2821 acctttggcc ttcctctcta catttaagag tagcaataga acaataaaaa aaaaatacgt
     2881 ctttcaaatt aattgcagta aaaacaaaag agtagtgggg agagaaaaac aatccaatac
     2941 atatttttct ctcagaatag aaagaaaaca caaagagaaa atatgaacaa tataaagcac
     3001 ttaaaggaag aggatgattt cttccagctt ttccacactc tctttatgcg caggaacaaa
     3061 cagctgttga gtgagctgct atgactttgg tagagaggtg caatatgttt tttgaaccag
     3121 ctataaaaga aattaagagg tacatgtgag ggtagaaaca aatatcaagg atgagaatgg
     3181 cactggctgt cccatatggt atccaggagc caccaatgtc tgttgagtac ttcatacatg
     3241 cctagtctga attgagatgt gctcaatgta taaaatatat accagatttc aaatacctac
     3301 ttcaaaaaat aatgtaaaat atctcactaa taacttttcc tttgtgtatt gcaatgataa
     3361 tatgttggct ctattggatt aaataaagta tgttattcat tttaaaaaaa aaaaaaaaaa
     3421 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//