LOCUS BC047452 2528 bp mRNA linear HTC 26-JUN-2007 DEFINITION Homo sapiens ATPase, Class I, type 8B family pseudogene, mRNA (cDNA clone IMAGE:5297817), with apparent retained intron. ACCESSION BC047452 VERSION BC047452.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2528) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2528) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (28-FEB-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 91 Row: j Column: 7 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..2528 /db_xref="H-InvDB:HIT000098595" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5297817" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 783 a 462 c 523 g 760 t ORIGIN 1 gggtctctag ggcgtctgcg caggaaggtg cgttgagatg gcagttgccg gagttggagg 61 ccgggcggcg acgaaattcc atggaattat agttggtcta ctctgcaatg tctctattta 121 aaagcccaag tgaggacaga caagatgaac gtagaacatg agagatatct gcaagccaac 181 aacaaagaat tcaacagtat ttttggatat ccgaacaatg ccatcaagac ctcaaaatat 241 agtgtcttta atttcctgcc cctgaaccta tttgaacagt tccagagact tgcaaatgca 301 tatttcctca ttttgctatt tttacagttg attccccaga tctcctcctt gacatggtat 361 acaactataa cacccctgat ggtggtgctg tccattaaca gctgtgaaag atgccatcga 421 tgacctgaaa aggcatcaaa gtgacgatcg agtcaacaac cagcctgttc tgctactggt 481 gaatggcaag ataaaggagg acaaatggat gaatgttcaa gtgggagata taataaaact 541 agaaaataat cagcctgtca tggcagatat actattactc tctagcagtg agccatatag 601 tctgacatac atagagacag cagacctgga tggtgaaacc aacctgaaag tgaagcaggc 661 catctcagtt accagtgaca tggaagatcg cctggagctt ctgtctacct ttaatggaga 721 agtgagatgt gaggctccca ataacaaatt ggacaaattc tcaggaatac tgacctataa 781 ggggaaaaac tacttcctgg accatgacaa gctgctactc tgaggctgca acatcaggaa 841 tacagattgg tgctatggct tggtgatcta cactgggcca gataccaaat taatgcagaa 901 tagtggaaag tccactttta aacgaacaca gatagaccat ctcatgaatg tccttgtact 961 ctgggtaagt taaatacttt tttttctttg tttctttaca aatagacata cttcccttcc 1021 tttcacagga gaaatggtat ttccagttca gaatttagct gtttgaaagt ctcaagcaca 1081 gcttcaagtg aagttaatct gaggtgaagc aaacagaaaa ttgtggaggt tttgttggtg 1141 tgcaatggag gaacatggct caagaaacta atcacagcca agtacctatg ctttgttcca 1201 ctggctgcgg attttatgga aaccctcgta caaatggcac gtgttcagta tgctataaag 1261 aacatcttca aagactgaat agtagtaatg gtagaataag ccaacctgca acctctgaat 1321 ctttaccagt tcaatgcaca gatggcagtg tcccagaagc ccagtcaaca ttagactcta 1381 catcttcatc tatgcagcca agccctgtat caaatcagtc acttttatca gaatctgtag 1441 catcttctca attggacagt acatctgtgg acaagcagta cctgaaacag aagatctgca 1501 ggcttcagta tcagacatgg cacagcagcc atctgaagag caaagcaagt ctcttgaaaa 1561 accaaaacaa aaaaagaatc tctgtttcat gtgcaggaag aaagtgggac ttactaggtt 1621 tgaatgcggt gtagaaatgt ttactgtggt gtacactgtt actcagatct acacaattgc 1681 tcttaaaatt acaaagctga tgccgctgag aaaatcagaa aagaaaatcc agtagttgtt 1741 ggcgagaaga tccaaaagat ttgaactcct gctggaatac aaaattcttg atcatctgca 1801 aactaaaaat tgacttgagg tttttttttc cctagtcatt gggaaagtag agcagtgtat 1861 cttgcatgtc atcggatgaa tagatttttg ttttgatttt gttttgaaaa tgactctgaa 1921 catttatttc cattgcaatt tctgtggctg agaagactta aactttacaa gtattatcct 1981 tataagatca ttttaatttt agttgagtgc agagggcttt tataacaaac gtgcagaaat 2041 tttggtggac tgtgattttt ccagtattaa atatgcatgc attaatcttg cagtttattt 2101 tctcattgtg tacatatata ttgcttttct ttgcagcacg atttctcttt tgataatgcc 2161 ctttggggca caactagtta tcggtaactg aatgtatctt aatcattatg gctgcttctg 2221 ttttttcatt aacaaaggtt attcatatgt tagcatatag tttctttgca cccactattt 2281 atgtctgaat catttgtcac gagagtgtgt gctgatgaga ttctaagttt gtgtgtttaa 2341 actttttttt gagcgaggga agaaaaagct gtatgcattt cattgctgtc tacaggtttc 2401 tttcagatta tgttcatggg tttgtgtgta tacgatatga agaatgatct gaagtaattg 2461 tgctgtattt atgtttattc accagtcttt gattaaataa aaaggaaaac cagaaaaaaa 2521 aaaaaaaa //