LOCUS BC046184 1947 bp mRNA linear HUM 19-OCT-2006 DEFINITION Homo sapiens jumonji, AT rich interactive domain 2, mRNA (cDNA clone IMAGE:5393382), partial cds. ACCESSION BC046184 VERSION BC046184.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1947) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1947) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 107 Row: e Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1947 /db_xref="H-InvDB:HIT000098309" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5393382" /tissue_type="Breast, mammary adenocarcinoma." /clone_lib="NIH_MGC_87" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1947 /gene="JARID2" /db_xref="GeneID:3720" /db_xref="HGNC:HGNC:6196" /db_xref="MIM:601594" CDS <1..1111 /gene="JARID2" /codon_start=2 /product="JARID2 protein" /protein_id="AAH46184.1" /db_xref="GeneID:3720" /db_xref="HGNC:HGNC:6196" /db_xref="MIM:601594" /translation="PVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGM VFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQML ESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWT SMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQ RRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQ ENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKNGSIENCL SKPTPKRGPRKRATVDVPPSRLSASSSSKSASSSS" BASE COUNT 507 a 448 c 496 g 496 t ORIGIN 1 cccagtagga aaatcagaac ccttttcgag gcatggatgg aacctcaccg tcctccccaa 61 taacacaggg tccatcctgc gtcacctcgg tgctgtgcct ggagtgacta ttccctggct 121 aaatattggc atggtctttt ctacctcatg ctggtctcga gaccaaaatc accttccata 181 cattgactac ttacacactg gtgctgactg catttggtat tgcattcctg ctgaggagga 241 gaacaagctg gaagatgtgg tccacaccct gctgcaagcc aatggcaccc cagggctgca 301 gatgctggaa agcaacgtca tgatctcccc ggaggtgctg tgcaaagagg ggatcaaggt 361 gcacaggacc gtgcagcaga gtggccagtt tgtcgtctgc ttcccgggat cctttgtgtc 421 caaagtgtgc tgtgggtaca gcgtgtctga aaccgtgcac tttgctacca cccagtggac 481 aagtatgggc tttgagaccg ccaaggaaat gaagcgtcgc catatagcta agccattctc 541 catggagaag ttactctacc agattgcaca agcagaagca aaaaaagaaa acggtcccac 601 tctcagtacc atctcagccc tcctggatga gctcagggat acagagctac ggcagcgcag 661 gcagctgttc gaggctggcc tccactcctc cgcacgctat ggcagccacg atggcagcag 721 cacggtggcg gacgggaaga aaaagcctcg aaagtggctg cagttggaga cgtcagagag 781 gaggtgtcag atctgccagc acctgtgcta cctgtccatg gtggtacaag agaacgaaaa 841 cgtcgtgttc tgtctggagt gtgctctgcg ccacgtggag aaacagaagt cctgccgagg 901 gctgaagttg atgtaccgct acgatgagga acagattatc agtctggtca atcagatctg 961 cggcaaagtg tctggtaaaa acggcagcat tgagaactgt ctcagtaaac ccacaccaaa 1021 aagaggtccc cgcaagagag cgacagtgga cgtgcccccc tcccgtctgt cagcctccag 1081 ttcatccaaa agtgcttcga gctcatcatg aagatgccaa cgcccgtggt cgatttatat 1141 atattttttt gtaattatta tattctagtt tggagtactt gctgtaggat tcaagctgtc 1201 tttgcactag ctctaaagaa gattttcttc tggttttaga gaactaattt tgttttagca 1261 ttaaactgtt gaactttttt ttgtacttag aaaacctaga tactgcagtc agattttgga 1321 aactgccgta tagtcactgt tttaaaaacc ccggaggggc tgtattaatt tgtattgccc 1381 catggctgac aaaagccttt tttttttgtt ttgatttttt ttttttgtaa ctgttggggg 1441 gaaaaaggct ttttaaccca tttttgaaga gggtgaagtt tggagaacaa atttaaaaac 1501 catcagtcat gtgagcagat tttttagaag ggataggaga cacacgcgca cacacacaca 1561 cacacacgaa acttgaaatg gctttgcttt ggctgtcgtc ttctgccgtg tgccagatga 1621 gcttgtgatc tgggaagccg gggcaccccc gttttgtttc tctgggcggt tgtggcagct 1681 gaaggcggac gttgtttcct aaccataggt ggaacgagga gacgggagcg agtgggctct 1741 ccaccagcac atcactatgc atctgttcca ggaaagaaga aaagcgagcg aggaagacgg 1801 aaaagactgc ctgccttgga ggggtcacat gagggagacc tgtgcctgat ttcattagga 1861 aatccattct gttatttttt ggtgctgttg gctactttat caaaaaaccc ttcaatagca 1921 tccttaagat ttaaaaaaaa aaaaaaa //