LOCUS BC045188 3784 bp mRNA linear HTC 27-OCT-2008 DEFINITION Homo sapiens cDNA clone IMAGE:5296213, with apparent retained intron. ACCESSION BC045188 VERSION BC045188.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3784) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3784) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 76 Row: k Column: 21 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..3784 /db_xref="H-InvDB:HIT000098021" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5296213" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" BASE COUNT 989 a 737 c 830 g 1228 t ORIGIN 1 agcgaaatgg aaaaattagc taggtgtagt ggcatgatca tggcttgctg cagccttgat 61 tcctgggctc aagccatctt cccgcctcag cctccccagt agctgggact atacacacat 121 accatctcat ctggctaaat tttaaaattt ttttgtggag atggggtccc actgtgttac 181 tcagtctggt cctgaactcc tgggctcaag tgatcctcct gcctcagcct cctgaagtgc 241 agggattgca ggcatgagcc actgcatctg gcctgattta gtgagtttgg acaaatgtat 301 acagtcatgg aaccaccacc acaatcaaca aaaggaacat ttccatcctc ttacagttat 361 tttgtgatcc ttttagtcaa tttccttccc tcattctcag cctcttccat ttctagttgt 421 atagttttgc ttttctagaa agttatataa atggaatcat atggtatgta gccttttgtg 481 tttggctttt tttatgtagc ataatagttt tgagaatcat ctgtgtcgtc gtatgtatca 541 gtagttttat tctattttat tgcagaatag gtagtccatt atatggatgc acaatttgtt 601 tatacattta ccagttgatg gacatttggg ttgtttccag ttttttatat tatgaataat 661 gctgctgcaa acattcatat acaggtcttt gtgtggatat acgtttctct ttttcttgga 721 tagataccta ggagtgagat tgctgggtcc tctggtctaa ggccgggcac agtggcacat 781 gcctgtaatc ccagcacctt tggaggcaga ggcgggagga ttgcttgagg tcaggagttc 841 gagaccagct tggccaacat ggtgaaaccc catctctact aaaaatataa aaattagctg 901 ggtgcggtgg catccacctg taatcccagc tactcaggag gctgaggcag gagaattgct 961 tcaaccctag aggcggaggt tgcagtgaac tgatatcgtg ccttccaaag tgctgggatt 1021 acagccatga accactgcgc ccagccagac ggattttttt aacccttgag aagtaccccc 1081 taaatgagca gtttgctctc ctcgctgatc ttcatcacac ctagatgtca ggtctgcttc 1141 atgggagctt gctctgtatg tatcctccct ggactgatgt tcaggctcct tgcttctcct 1201 cccgggttgt gggtatggag ggtttgccct ctgacaactc cagggtactt gtggtgctca 1261 tacatcctca tgtactttgc tttctccccg caagaggttc cctaatgctt ctgtgacttt 1321 tttcttctgg ctacatcctg aagtctggcc ttgcaggcag gctgggaatg gaaagttaag 1381 agtgtgacgt cctctgacac cctcccttct tgtagaaggg tctgaggttt gtttatttaa 1441 gctgagcaga ggatgccaaa gatagaggtt tgagtcagct tgacactggc ttaggcgctc 1501 cttttcactc tccttgttcc ttcttccctt tcccctcccc cgctggccag ttgtttcctg 1561 ggctttgtct gagatacact gtacagtttt agtcccagtc tactagcgcc tgctgaaaaa 1621 cagtcagaag tgagatggag gagaagctgc caggaagttt ctgacaacac taagctccgg 1681 cctctgcctc tgctgatagt acaggacaac agtaacctca ggagaaaggc atccagaggc 1741 ctgcgctgag cttgtggcta actcaaggga ggagaaagga cgggcctgga aatgcccctc 1801 ttagattcat cttatttacc accaaccatc tttattttga ctcacgttct tggagttgct 1861 ggtgttctat actggaagag gcatgccaga ggtagagcag gtaactaact ggtacccagt 1921 tattctttaa atctactgtg gggcttttga gggtggggtg aatgatggag gtcttcccag 1981 ttgctttcct taaagggcca gtacgtcctt cagctggggt gctgtcagac ttaagagtgt 2041 gtgtgtgtga gtataatgaa gaagctggtc tgccctgggg ccactttggg atgggggtgg 2101 tgctcttttc tgttctgtga gtctgtctgg agagtgctgg ttagatgagg tgatgactgg 2161 gctcaaaact gaagggaagt ggctgctgtg ctgacttagt ctttcctcag agaactgagc 2221 tctttctttc tcaatctcag agtggtttct tggaaccttg tttttaactg aaaacataca 2281 gtaactcttt taccctcctc caggtataga tttgggttgg agaagtttct gttaacttgg 2341 tgtgttttgg ggtgagaaaa ggcagaggag gaagggtcag tcagtggaag gggtcgtgcg 2401 atgtccttgc cgaggggcat cctggaacac tgggtgtctg tgttctcttt gatatcattg 2461 atactgttcc tacacagttt ggctatgtgt atccaaatca tcttgttcaa tgcaaggaag 2521 ttaatccctc tcttccctag ggaatcaggc tttgataatt aaaaaaaaat ttttttttgt 2581 aatggcaaca gaaccctcat tctttccata ttgctattag ttatattctg ttgacttcta 2641 aacactcaga gcagggatca gccctgagtt tggctgattc tgagtctcca tggttgagga 2701 ttcatatggt ctaactttta ctggagtgta tacccttggg tctcattgcc ttcagtactc 2761 tcattgtgat gggctcacta ccttcaaact taggtatgta gacacttttt atagtgtatc 2821 ttacaagtta aggtggggat ttgatggctt attatttagc tttctattaa aagttcacaa 2881 acgcctgaca gaattagaat tagattcaat cattccccag tgtcctttcc agtaagtccc 2941 agaaaagctt ttgactaaat attcagatcc tagtgtgcat ctatagcagc ggaaacaaag 3001 acagacattt tagaagtgtg tttgattgtg tggtggtgtt tttaaaaaag ccacctcaaa 3061 gtggctttcc tgtatttgaa cttagaaaga aagagatagg caggcttaag ttgtttggtc 3121 ctatttacta tttcacatgt aatgagaaaa taaatacaat atcatttagg tagaggctgc 3181 tgcttttctt tccttgtgca ttatggtaat gtcattttta aacattaaat aactaattag 3241 ttgttaatat ttttaaagtt tatcttcagt ataggacttt aatggaactt aagagctatc 3301 actgtatttt aagtgctttc ttttttatgt ttagaaatgt taatttcata aacagccata 3361 aagtaattga aataaaaaga tacattgtaa aagcttttta tttctatgaa acaactttga 3421 ttctaatacc aaatagttat atcgggaatg tgctacgttt gctttatctg taaaatgaga 3481 gatgtcattt ttcaattgga ggctatggat tccaaatctt ccatggagtt acttacgaga 3541 ttctgtaccc attttattat aattgcaatt ttaagatgca tttcatttat ttaaaaatgt 3601 atttttaaaa ataatatgta cactctaatt acctgccagt tggacatcac agaataaagt 3661 ttttccacca tctctgtgta tatatttgta ctattaataa atgtacactt gattaaaaac 3721 acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa 3781 aaaa //