LOCUS BC044211 1942 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens serine hydroxymethyltransferase 2 (mitochondrial), mRNA (cDNA clone MGC:49833 IMAGE:5521082), complete cds. ACCESSION BC044211 VERSION BC044211.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1942) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1942) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: d Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52851445. FEATURES Location/Qualifiers source 1..1942 /db_xref="H-InvDB:HIT000052846" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:49833 IMAGE:5521082" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1942 /gene="SHMT2" /gene_synonym="GLYA" /db_xref="GeneID:6472" /db_xref="HGNC:HGNC:10852" /db_xref="MIM:138450" CDS 47..1561 /gene="SHMT2" /gene_synonym="GLYA" /codon_start=1 /product="serine hydroxymethyltransferase 2 (mitochondrial)" /protein_id="AAH44211.1" /db_xref="GeneID:6472" /db_xref="HGNC:HGNC:10852" /db_xref="MIM:138450" /translation="MLYFSLFWAARPLQRCGQLVRMAIRAQHSNAAQTQTGEANRGWT GQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPG KRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR IMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRP RLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTT TTHKTLRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAA VAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLD GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDE GVNIGLEVKSKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDEH" BASE COUNT 431 a 537 c 550 g 424 t ORIGIN 1 ctagaccaga gttggtggct ggacctcctg cgacttccga gttgcgatgc tgtacttctc 61 tttgttttgg gcggctcggc ctctgcagag atgtgggcag ctggtcagga tggccattcg 121 ggctcagcac agcaacgcag cccagactca gactggggaa gcaaacaggg gctggacagg 181 ccaggagagc ctgtcggaca gtgatcctga gatgtgggag ttgctgcaga gggagaagga 241 caggcagtgt cgtggcctgg agctcattgc ctcagagaac ttctgcagcc gagctgcgct 301 ggaggccctg gggtcctgtc tgaacaacaa gtactcggag ggttatcctg gcaagagata 361 ctatggggga gcagaggtgg tggatgaaat tgagctgctg tgccagcgcc gggccttgga 421 agcctttgac ctggatcctg cacagtgggg agtcaatgtc cagccctact ccgggtcccc 481 agccaacctg gccgtctaca cagcccttct gcaacctcac gaccggatca tggggctgga 541 cctgcccgat gggggccatc tcacccacgg ctacatgtct gacgtcaagc ggatatcagc 601 cacgtccatc ttcttcgagt ctatgcccta taagctcaac cccaaaactg gcctcattga 661 ctacaaccag ctggcactga ctgctcgact tttccggcca cggctcatca tagctggcac 721 cagcgcctat gctcgcctca ttgactacgc ccgcatgaga gaggtgtgtg atgaagtcaa 781 agcacacctg ctggcagaca tggcccacat cagtggcctg gtggctgcca aggtgattcc 841 ctcgcctttc aagcacgcgg acatcgtcac caccactact cacaagactc ttcgaggggc 901 caggtcaggg ctcatcttct accggaaagg ggtgaaggct gtggacccca agactggccg 961 ggagatccct tacacatttg aggaccgaat caactttgcc gtgttcccat ccctgcaggg 1021 gggcccccac aatcatgcca ttgctgcagt agctgtggcc ctaaagcagg cctgcacccc 1081 catgttccgg gagtactccc tgcaggttct gaagaatgct cgggccatgg cagatgccct 1141 gctagagcga ggctactcac tggtatcagg tggtactgac aaccacctgg tgctggtgga 1201 cctgcggccc aagggcctgg atggagctcg ggctgagcgg gtgctagagc ttgtatccat 1261 cactgccaac aagaacacct gtcctggaga ccgaagtgcc atcacaccgg gcggcctgcg 1321 gcttggggcc ccagccttaa cttctcgaca gttccgtgag gatgacttcc ggagagttgt 1381 ggactttata gatgaagggg tcaacattgg cttagaggtg aagagcaaga ctgccaagct 1441 ccaggatttc aaatccttcc tgcttaagga ctcagaaaca agtcagcgtc tggccaacct 1501 caggcaacgg gtggagcagt ttgccagggc cttccccatg cctggttttg atgagcattg 1561 aaggcacctg ggaaatgagg cccacagact caaagttact ctccttcccc ctacctgggc 1621 cagtgaaata gaaagccttt ctattttttg gtgcgggagg gaagacctct cacttagggc 1681 aagagccagg tatagtctcc cttcccagaa tttgtaactg agaagatctt ttctttttcc 1741 tttttttggt aacaagactt agaaggaggg cccaggcact ttctgtttga acccctgtca 1801 tgatcacagt gtcagagacg cgtcctcttt cttggggaag ttgaggagtg cccttcagag 1861 ccagtagcag gcaggggtgg gtaggcaccc tccttcctgt ttttatctaa taaaatgcta 1921 acctgcaaaa aaaaaaaaaa aa //