LOCUS BC042741 1958 bp mRNA linear ROD 02-DEC-2006
DEFINITION Mus musculus cytotoxic T-lymphocyte-associated protein 4, mRNA
(cDNA clone MGC:51581 IMAGE:4936052), complete cds.
ACCESSION BC042741
VERSION BC042741.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lothar Hennighausen Ph.D., Priscilla Furth
Ph.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 92 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31981846.
FEATURES Location/Qualifiers
source 1..1958
/organism="Mus musculus"
/mol_type="mRNA"
/strain="NMRI"
/db_xref="taxon:10090"
/clone="MGC:51581 IMAGE:4936052"
/tissue_type="Mammary tumor. WAP-Tag model. 5 months old,
gross tissue."
/clone_lib="NCI_CGAP_Mam4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1958
/gene="Ctla4"
/gene_synonym="Ly-56"
/db_xref="GeneID:12477"
/db_xref="MGI:MGI:88556"
CDS 147..818
/gene="Ctla4"
/gene_synonym="Ly-56"
/codon_start=1
/product="cytotoxic T-lymphocyte-associated protein 4"
/protein_id="AAH42741.1"
/db_xref="GeneID:12477"
/db_xref="MGI:MGI:88556"
/translation="MACLGLRRYKAQLQLPSRTWPFVALLTLLFIPVFSEAIQVTQPS
VVLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPF
CSGTFNESRVNLTIQGLRAVDTGLYLCKVELMYPPPYFVGMGNGTQIYVIDPEPCPDS
DFLLWILVAVSLGLFFYSFLVTAVSLSKMLKKRSPLTTGVYVKMPPTEPECEKQFQPY
FIPIN"
BASE COUNT 548 a 395 c 430 g 585 t
ORIGIN
1 ctacacatat gtagcacgta ccttggatca aagctgtcta tataaagtcc ccgagtctgt
61 gtgggttcaa acacatctca aggcttctgg atcctgttgg gttttactct gctccctgag
121 gacctcagca catttgcccc ccagccatgg cttgtcttgg actccggagg tacaaagctc
181 aactgcagct gccttctagg acttggcctt ttgtagccct gctcactctt cttttcatcc
241 cagtcttctc tgaagccata caggtgaccc aaccttcagt ggtgttggct agcagccatg
301 gtgtcgccag ctttccatgt gaatattcac cgtcacacaa cactgatgag gtccgggtga
361 ctgtgctgcg gcagacaaat gaccaaatga ctgaggtctg tgccacgaca ttcacagaga
421 agaatacagt gggcttccta gattacccct tctgcagtgg tacctttaat gaaagcagag
481 tgaacctcac catccaagga ctgagagctg ttgacacggg actgtacctc tgcaaggtgg
541 aactcatgta cccaccgcca tactttgtgg gcatgggcaa cgggacgcag atttatgtca
601 ttgatccaga accatgcccg gattctgact tcctcctttg gatccttgtc gcagttagct
661 tggggttgtt tttttacagt ttcctggtca ctgctgtttc tttgagcaag atgctaaaga
721 aaagaagtcc tcttacaaca ggggtctatg tgaaaatgcc cccaacagag ccagaatgtg
781 aaaagcaatt tcagccttat tttattccca tcaactgaaa ggccgtttat gaagaagaag
841 gagcatactt cagtctctaa aagctgaggc aatttcaact ttccttttct ctccagctat
901 ttttacctgt ttgtatattt taaggagagt atgcctctct ttaatagaaa gctggatgca
961 aaattccaat taagcatact acaatttaaa gctaaggagc atgaacagag agctgggata
1021 tttctgttgt gtcagaacca ttttactaaa agcatcactt ggaagcagca taaggatata
1081 gcattatggt gtggggtcaa gggaacatta gggaatggca cagcccaaag aaaggaaggg
1141 ggtgaaggaa gagattatat tgtacacatc ttgtatttac ctgagagatg tttatgactt
1201 aaataatttt taaatttttc atgctgttat tttctttaac aatgtataat tacacgaagg
1261 tttaaacatt tattcacaga gctatgtgac atagccagtg gttccaaagg ttgtagtgtt
1321 ccaagatgta tttttaagta atattgtaca tgggtgtttc atgtgctgtt gtgtatttgc
1381 tggtggtttg aatataaaca ctatgtatca gtgtcgtccc acagtgggtc ctggggaggt
1441 ttggctgggg agcttaggac actaatccat caggttggac tcgaggtcct gcaccaactg
1501 gcttggaaac tagatgaggc tgtcacaggg ctcagttgca taaaccgatg gtgatggagt
1561 gtaaactggg tctttacact cattttattt tttgtttctg cttttgtttt cttcaatgat
1621 ttgcaaggaa accaaaagct ggcagtgttt gtatgaacct gacagaacac tgtcttcaag
1681 gaaatgcctc attcctgaga ccagtaggtc tgttttttta ggaagttcca atactaggac
1741 cccctacaag tactatggct cctcgaaaac acaaagttaa tgccacagga agcagcagat
1801 ggtaggatgg gatgcacaag agttcctgaa aactaacact gttagtgttt ttttttttaa
1861 ctcaatattt tccatgaaaa tgcaaccaca tgtataatat ttttaattaa ataaaagttt
1921 cttgtgattg ttaaaaaaaa aaaaaaaaaa aaaaaaaa
//