LOCUS       BC042418                3070 bp    mRNA    linear   HUM 06-OCT-2003
DEFINITION  Homo sapiens protein phosphatase 1D magnesium-dependent, delta
            isoform, mRNA (cDNA clone MGC:35090 IMAGE:5167004), complete cds.
ACCESSION   BC042418
VERSION     BC042418.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JAN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 52 Row: o Column: 2.
FEATURES             Location/Qualifiers
     source          1..3070
                     /db_xref="H-InvDB:HIT000052688"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:35090 IMAGE:5167004"
                     /tissue_type="Brain, adult medulla"
                     /clone_lib="NIH_MGC_119"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3070
                     /gene="PPM1D"
                     /gene_synonym="PP2C-DELTA"
                     /gene_synonym="WIP1"
                     /db_xref="GeneID:8493"
                     /db_xref="MIM:605100"
     CDS             147..1439
                     /gene="PPM1D"
                     /gene_synonym="PP2C-DELTA"
                     /gene_synonym="WIP1"
                     /codon_start=1
                     /product="PPM1D protein"
                     /protein_id="AAH42418.1"
                     /db_xref="GeneID:8493"
                     /db_xref="MIM:605100"
                     /translation="MAGLYSLGVSVFSDQGGRKYMEDVTQIVVEPEPTAEEKPSPRRS
                     LSQPLPPRPSPAALPGGEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFA
                     VCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLAEW
                     PKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHK
                     PELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALG
                     DLWSYDFFSGEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEE
                     KKYLMGEHGQSCAKMLVNRALGRWRQRMLRADNTSAIVICISPEVDNQGNFTNEDELY
                     LNLTDSPSYNSQETCVMTPSPCSTPPVKDFGFELDSRK"
     misc_feature    345..1250
                     /gene="PPM1D"
                     /gene_synonym="PP2C-DELTA"
                     /gene_synonym="WIP1"
                     /note="PP2C; Region: Protein phosphatase 2C. Protein
                     phosphatase 2C is a Mn++ or Mg++ dependent protein
                     serine/threonine phosphatase"
                     /db_xref="CDD:pfam00481"
BASE COUNT          905 a          658 c          696 g          811 t
ORIGIN      
        1 cgcgcccccc cttctccggg tccgccccct cccccttctc ggcgtcgtcg aagataaaca
       61 atagttggcc ggcgagcgcc tagtgtgtct cccgccgccg gattcggcgg gctgcgtggg
      121 accggcggga tcccggccag ccggccatgg cggggctgta ctcgctggga gtgagcgtct
      181 tctccgacca gggcgggagg aagtacatgg aggacgttac tcaaatcgtt gtggagcccg
      241 aaccgacggc tgaagaaaag ccctcgccgc ggcggtcgct gtctcagccg ttgcctccgc
      301 ggccgtcgcc ggccgccctt cccggcggcg aagtctcggg gaaaggccca gcggtggcag
      361 cccgagaggc tcgcgaccct ctcccggacg ccggggcctc gccggcacct agccgctgct
      421 gccgccgccg ttcctccgtg gcctttttcg ccgtgtgcga cgggcacggc gggcgggagg
      481 cggcacagtt tgcccgggag cacttgtggg gtttcatcaa gaagcagaag ggtttcacct
      541 cgtccgagcc ggctaaggtt tgcgctgcca tccgcaaagg ctttctcgct tgtcaccttg
      601 ccatgtggaa gaaactggcg gaatggccaa agactatgac gggtcttcct agcacatcag
      661 ggacaactgc cagtgtggtc atcattcggg gcatgaagat gtatgtagct cacgtaggtg
      721 actcaggggt ggttcttgga attcaggatg acccgaagga tgactttgtc agagctgtgg
      781 aggtgacaca ggaccataag ccagaacttc ccaaggaaag agaacgaatc gaaggacttg
      841 gtgggagtgt aatgaacaag tctggggtga atcgtgtagt ttggaaacga cctcgactca
      901 ctcacaatgg acctgttaga aggagcacag ttattgacca gattcctttt ctggcagtag
      961 caagagcact tggtgatttg tggagctatg atttcttcag tggtgaattt gtggtgtcac
     1021 ctgaaccaga cacaagtgtc cacactcttg accctcagaa gcacaagtat attatattgg
     1081 ggagtgatgg actttggaat atgattccac cacaagatgc catctcaatg tgccaggacc
     1141 aagaggagaa aaaatacctg atgggtgagc atggacaatc ttgtgccaaa atgcttgtga
     1201 atcgagcatt gggccgctgg aggcagcgta tgctccgagc agataacact agtgccatag
     1261 taatctgcat ctctccagaa gtggacaatc agggaaactt taccaatgaa gatgagttat
     1321 acctgaacct gactgacagc ccttcctata atagtcaaga aacctgtgtg atgactcctt
     1381 ccccatgttc tacaccacca gtcaaggatt ttggatttga actcgattca agaaagtgat
     1441 gtaacttatt atcagagagc catctttaca tcaatactaa tctgaatgcc agccatgtgt
     1501 acagcactaa taaaaagtca ctggaggagg atccatggcc aagggtgaat tctaaggacc
     1561 atatacctgc cctggttcgt agcaatgcct tctcagagaa ttttttagag gtttcagctg
     1621 agatagctcg agagaatgtc caaggtgtag tcataccctc aaaagatcca gaaccacttg
     1681 aagaaaattg cgctaaagcc ctgactttaa ggatacatga ttctttgaat aatagccttc
     1741 caattggcct tgtgcctact aattcaacaa acactgtcat ggaccaaaaa aatttgaaga
     1801 tgtcaactcc tggccaaatg aaagcccaag aaattgaaag aacccctcca acaaacttta
     1861 aaaggacatt agaagagtcc aattctggcc ccctgatgaa gaagcataga cgaaatggct
     1921 taagtcgaag tagtggtgct cagcctgcaa gtctccccac aacctcacag cgaaagaact
     1981 ctgttaaact caccatgcga cgcagactta ggggccagaa gaaaattgga aatcctttac
     2041 ttcatcaaca caggaaaact gtttgtgttt gctgaaatgc atctgggaaa tgaggttttt
     2101 ccaaacttag gatataagag ggctttttaa atttggtgcc gatgttgaac tttttttaag
     2161 gggagaaaat taaaagaaat atacagtttg actttttgga attcagcagt tttatcctgg
     2221 ccttgtactt gcttgtattg taaatgtgga ttttgtagat gttagggtat aagttgctgt
     2281 aaaatttgtg taaatttgta tccacacaaa ttcagtctct gaatacacag tattcagagt
     2341 ctctgataca cagtaattgt gacaataggg ctaaatgttt aaagaaatca aaagaatcta
     2401 ttagatttta gaaaaacatt taaacttttt aaaatactta ttaaaaaatt tgtataagcc
     2461 acttgtcttg aaaactgtgc aactttttaa agtaaattat taagcagact ggaaaagtga
     2521 tgtattttca tagtgacctg tgtttcactt aatgtttctt agagccaagt gtcttttaaa
     2581 cattattttt tatttctgat ttcataattc agaactaaat ttttcataga agtgttgagc
     2641 catgctacag ttagtcttgt cccaattaaa atactatgca gtatctctta catcagtagc
     2701 atttttctaa aaccttagtc atcagatatg cttactaaat cttcagcata gaaggaagtg
     2761 tgtttgccta aaacaatcta aaacaattcc cttctttttc atcccagacc aatggcatta
     2821 ttaggtctta aagtagttac tcccttctcg tgtttgctta aaatatgtga agttttcctt
     2881 gctatttcaa taacagatgg tgctgctaat tcccaacatt tcttaaatta ttttatatca
     2941 tacagttttc attgattata tgggtatata ttcatctaat aaatcagtga actgttaaaa
     3001 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3061 aaaaaaaaaa
//