LOCUS BC041974 2985 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens spondin 1, extracellular matrix protein, mRNA (cDNA
clone IMAGE:5302901), partial cds.
ACCESSION BC041974
VERSION BC041974.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2985)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2985)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 77 Row: k Column: 2.
FEATURES Location/Qualifiers
source 1..2985
/db_xref="H-InvDB:HIT000097011"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5302901"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..2985
/gene="SPON1"
/gene_synonym="f-spondin"
/gene_synonym="KIAA0762"
/gene_synonym="MGC10724"
/db_xref="GeneID:10418"
/db_xref="MIM:604989"
CDS <1..775
/gene="SPON1"
/gene_synonym="f-spondin"
/gene_synonym="KIAA0762"
/gene_synonym="MGC10724"
/codon_start=2
/product="SPON1 protein"
/protein_id="AAH41974.1"
/db_xref="GeneID:10418"
/db_xref="MIM:604989"
/translation="IEECSPSSCLMTEWGEWDECSATCGMGMKKRHRMIKMNPADGSM
CKAETSQAEKCMMPECHTIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNE
DLEQVEKCMLPECPIDCELTEWSQWSECNKSCGKGHVIRTRMIQMEPQFGGAPCPETV
QRKKCRIRKCLRNPSIQKLRWREARESQRSEQLKEESEGEQFPGCRMRPWTAWSECTK
LCGGGIQERYMTVKKRFKSSQFTSCKDKKEIRACNVHPC"
BASE COUNT 865 a 633 c 660 g 827 t
ORIGIN
1 catcgaggag tgctctccca gcagctgcct gatgaccgag tggggcgagt gggacgagtg
61 cagcgccacc tgcggcatgg gcatgaagaa gcggcaccgc atgatcaaga tgaaccccgc
121 agatggctcc atgtgcaaag cagagacatc acaggcagag aagtgcatga tgccagagtg
181 ccacaccatc ccatgcttgc tgtccccatg gtccgagtgg agtgactgca gcgtgacctg
241 cgggaagggc atgcgaaccc gacagcggat gctcaagtct ctggcagaac ttggagactg
301 caatgaggat ctggagcagg tggagaagtg catgctccct gaatgcccca ttgactgtga
361 gctcaccgag tggtcccagt ggtcggaatg taacaagtca tgtgggaaag gccacgtgat
421 tcgaacccgg atgatccaaa tggagcctca gtttggaggt gcaccctgcc cagagactgt
481 gcagcgaaaa aagtgccgca tccgaaaatg ccttcgaaat ccatccatcc aaaagctacg
541 ctggagggag gcccgagaga gccagcggag tgagcagctg aaggaagagt ctgaagggga
601 gcagttccca ggttgtagga tgcgcccatg gacggcctgg tcagaatgca ccaaactgtg
661 cggaggtgga attcaggaac gttacatgac tgtaaagaag agattcaaaa gctcccagtt
721 taccagctgc aaagacaaga aggagatcag agcatgcaat gttcatcctt gttagcaagg
781 gtacgagttc cccagggctg cactctagat tccagagtca ccaatggctg gattatttgc
841 ttgtttaaga caatttaaat tgtgtacgct agttttcatt tttgcagtgt ggttcgccca
901 gtagtcttgt ggatgccaga gacatccttt ctgaatactt cttgatgggt acaggctgag
961 tggggcgccc tcacctccag ccagcctctt cctgcagagg agtagtgtca gccaccttgt
1021 actaagctga aacatgtccc tctggagctt ccacctggcc agggaggacg gagactttga
1081 cctactccac atggagaggc aaccatgtct ggaagtgact atgcctgagt cccagggtgc
1141 ggcaggtagg aaacattcac agatgaagac agcagattcc ccacattctc atctttggcc
1201 tgttcaatga aaccattgtt tgcccatctc ttcttagtgg aactttaggt ctcttttcaa
1261 gtctcctcag tcatcaatag ttcctgggga aaaacagagc tggtagactt gaagaggagc
1321 attgatgttg ggtggctttt gttctttcac tgagaaattc ggaatacatt tgtctcaccc
1381 ctgatattgg ttcctgatgc ccccccaaca aaaataaata aataaattat ggctgcttta
1441 tttaaatata aggtagctag tttttacacc tgagataaat aataagctta gagtgtattt
1501 ttcccttgct tttgggggtt cagaggagta tgtacaattc ttctgggaag ccagccttct
1561 gaactttttg gtactaaatc cttattggaa ccaagacaaa ggaagcaaaa ttggtctctt
1621 tagagaccaa tttgcctgaa ttttaaaatc ttcctacaca catctagact ttcaagtttg
1681 caaatcagtt tttagcaaga aaacattttt gctatacaaa cattttgcta agtctgccca
1741 aagccccccc aatgcattcc ttcaacaaaa tacaatctct gtactttaaa gttattttag
1801 tcatgaaatt ttatatgcag agagaaaaag ttaccgagac agaaaacaaa tctaagggaa
1861 aggaatatta tgggattaag ctgagcaagc aattctggtg gaaagtcaaa cctgtcagtg
1921 ctccacacca gggctgtggt cctcccagac atgcatagga atggccacag gtttacactg
1981 ccttcccagc aattataagc acaccagatt cagggagact gaccaccaag ggatagtgta
2041 aaaggacatt ttctcagttg ggtccatcag cagtttttct tcctgcattt attgttgaaa
2101 actattgttt catttcttct tttataggcc ttattactgc ttaatccaaa tgtgtaccat
2161 tggtgagaca catacaatgc tctgaataca ctacgaattt gtattaaaca catcagaata
2221 tttccaaata caacatagta tagtcctgaa tatgtacttt tcacaagaga gactattcaa
2281 tgaaaactca ctgggtcttt catgtcttta agctaagtaa gtgttcagaa ggttcttttt
2341 tatattgtcc tccacctcca tcattttcaa taaaagatag ggcttttgct cccttgttct
2401 tggagggacc attattacat ctctgaacta cctttgtatc caacatgttt taaatcctta
2461 aatgaattgc tttctcccaa aaaaagcaca atataaagaa acacaagatt taattatttt
2521 tctacttggg gggaaaaaaa gtcctcatgt agaagcaccc acttttgcaa tgttgttcta
2581 agctatctat ctatctctca gcccatgata aagttcctta agctggtgat tcataatcaa
2641 ggacaagcca ccctagtgtc tcatgtttgt atttggtccc agttgggtac attttaaaat
2701 cctgattttg tagacttaaa accaggttaa tggctaagaa tgggtaacat gactcttgtt
2761 ggattgttat tttttgtttg caatggggaa tttataagaa gcatcaagtc tctttcttac
2821 caaagtcttg ttaggtggtt tatagttctt ttggctaaca aatcattttg gaaataaaga
2881 ttttttacta caaaaatgaa atttgtttgg acttccactt gagacagtaa agagagtatt
2941 agacacccag taaaaactgc catataaaga aaaaaaaaaa aaaaa
//