LOCUS BC041772 3457 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens spinster homolog 2 (Drosophila), mRNA (cDNA clone
MGC:27061 IMAGE:4814561), complete cds.
ACCESSION BC041772
VERSION BC041772.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3457)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3457)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: k Column: 23.
FEATURES Location/Qualifiers
source 1..3457
/db_xref="H-InvDB:HIT000096854"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27061 IMAGE:4814561"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3457
/gene="SPNS2"
/db_xref="GeneID:124976"
/db_xref="HGNC:HGNC:26992"
CDS 211..1860
/gene="SPNS2"
/codon_start=1
/product="SPNS2 protein"
/protein_id="AAH41772.2"
/db_xref="GeneID:124976"
/db_xref="HGNC:HGNC:26992"
/translation="MMCLECASAAAGGAEEEEADAERRRRRRGAQRGAGGSGCCGARG
AGGAGVSAAGDEVQTLSGSVRRAPTGPPGTPGTPGCAATAKGPGAQQPKPASLGRGRG
AAAAILSLGNVLNYLDRYTVAGVLLDIQQHFGVKDRGAGLLQSVFICSFMVAAPIFGY
LGDRFNRKVILSCGIFFWSAVTFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTII
GDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVKQAAGDWHWALRVSPVLGMITGTL
ILILVPATKRGHADQLGDQLKARTSWLRDMKALIRNRSYVFSSLATSAVSFATGALGM
WIPLYLHRAQVVQKTAETCNSPPCGAKDSLIFGAITCFTGFLGVVTGAGATRWCRLKT
QRADPLVCAVGMLGSAIFICLIFVAAKSSIVGAYICIFVGETLLFSNWAITADILMYV
VIPTRRATAVALQSFTSHLLGDAGSPYLIGFISDLIRQSTKDSPLWEFLSLGYALMLC
PFVVVLGGMFFLATALFFVSDRARAEQQVNQLAMPPASVKV"
BASE COUNT 608 a 1134 c 1080 g 635 t
ORIGIN
1 gggggcgggc cgcagctgtc agagccgcgg cggcgaacga ggcgcagcga gctgagcggt
61 ggcagcgccg cagccggggc cggagcgcag gagccgacgg ggcccgacca ggatggtgca
121 gtggcggctc cgcggcgcac gcacgcgctg agcgggccca gcctgggccc cgcgcccccc
181 gcgccccccg ccgccccgat ccgggccggc atgatgtgcc tggaatgcgc ctcggcggcg
241 gcgggcggcg cggaggagga ggaggcggac gcggagcggc ggcgccggcg ccggggggcg
301 cagcgagggg ctggcggtag cggttgctgc ggggcgcggg gcgcgggcgg cgctggagtc
361 tcggccgcgg gcgatgaggt gcagacgctg tcgggcagcg taaggcgggc cccgaccgga
421 ccccccggca cccccggcac ccccggctgc gcagctactg caaagggccc cggcgctcag
481 cagcccaaac cggccagctt gggccgcggg cggggggcag ccgccgccat cctcagcttg
541 ggcaacgtgc tcaactacct ggacaggtac accgtggcag gcgtccttct ggacatccag
601 cagcactttg gggtcaagga ccgaggcgcc ggcctgctgc agtcagtgtt catctgtagc
661 ttcatggtgg ctgcccccat cttcggctac ctgggcgacc gcttcaacag gaaggtgatt
721 ctcagctgcg gcattttctt ctggtcggcc gtcaccttct ccagctcctt cattccccag
781 cagtacttct ggctgctggt cctgtcccgg gggctggtgg gcatcgggga ggccagctac
841 tccaccatcg cccccactat cattggcgac ctcttcacca agaacacgcg tacgctcatg
901 ctgtccgtct tctacttcgc catcccactg ggcagtggcc tgggctacat tactggctcc
961 agcgtgaagc aggcagccgg agactggcac tgggcattgc gggtgtcccc tgtcctgggc
1021 atgatcacag gaacactcat cctcattctg gtcccagcca ctaaaagggg tcatgccgac
1081 cagctcgggg accagctcaa ggcccggacc tcatggctcc gagatatgaa ggccctgatt
1141 cgaaaccgca gctacgtctt ctcctccctg gccacgtcgg ctgtctcctt cgccacgggg
1201 gccctgggca tgtggatccc gctctacctg caccgcgccc aagttgtgca gaagacagca
1261 gagacgtgca acagcccgcc ctgtggggcc aaggacagcc tcatctttgg ggccatcacc
1321 tgctttacgg gatttctggg cgtggtcacg ggggcaggag ccacgcgctg gtgccgcctg
1381 aagacccagc gggccgaccc actggtgtgt gccgtgggca tgctgggctc tgccatcttc
1441 atctgcctga tcttcgtggc tgccaagagc agcatcgtag gagcctatat ctgtatcttc
1501 gtcggggaga cgctgctgtt ttctaactgg gccatcactg cagacatcct catgtacgtg
1561 gtcatcccca cgcggcgcgc cactgccgtg gccttgcaga gcttcacctc ccacctgctg
1621 ggggacgccg ggagccccta cctcattggc tttatctcag acctgatccg ccagagcact
1681 aaggactccc cgctctggga gttcctgagc ctgggctacg cgctcatgct ctgccctttc
1741 gtcgtggtcc tgggcggcat gttcttcctc gccactgcgc tcttcttcgt cagcgaccgc
1801 gccagggctg agcagcaggt gaaccagctg gcgatgccgc ccgcatctgt gaaagtctga
1861 ggtggtgcca ttgggacaat gaagaaccca cactcccacc tcgtctggga ggtgtcctac
1921 agcgtccggg accggctggg ctgccccaaa gctttctgtg tgatccacgg ctaggcaccc
1981 accctctctg gcccaggcct gctgagtggc cctggcatca agaagaggct gtgtcctcag
2041 ttaccctgga aggatgtgtg tgttggagcc acacggttgg acaggttccc agccctaggt
2101 ttgggccgca gggcccctgg ggccaaggaa gaagacagcc ccaagtgggt gtccggggag
2161 agcctggcct gccaccagct tatgtgatct tgggcaagtc cctgccctcc ctggaacgaa
2221 gggccagggg gctggacttt cccacacaac ttgctgggca aagcacgatc tgcagctttg
2281 aagactcaac agaccctgga ccatacggag agcaggtggc ccaggcctca gggcggcagt
2341 cccggctttg aggctcacgc gagggcctgg tatgcaggga ccactgctca gctgggcctc
2401 ggaccttggg gatattggac gcaacctggc aaatgaagct gggcgcccaa gtctctgggt
2461 actccctgga ggacactgtc tcactgtctc gggttggctc ccagcctgga ggtcccagat
2521 ggggactgtt ctgacaagct ggcatcacca ggggtgaagg ccctggctgc agctgtacac
2581 cacctgtgcc cccaggctca aggtctctgg caggtgcaca ccagcccaac tctgcagggc
2641 ttctctccct gccaccaccc cccaagccag gaccccactc cttccccgag gctgagctga
2701 gccttttcca ggggcagggc ccaggagacc attcccagaa tccatggggc agtagccagg
2761 gctccggctg ctggaggaag cagctatcca caaagcttcc tgccccagag ctgaggctga
2821 ggccccggga gaggcggccc ctacccaaac actggctgct ggcattccac caagtgaccc
2881 caggggccag gccttcgatc acccacctcc catccatgca cacaccagga tgcagctgcc
2941 aacttcacac cagccccaac ccgctttggg ggagcttagc cccctgcgtc acccactccc
3001 tgcacttctg ctgcaatcaa ggtggttctg gtgcgggggt ggggtggggg gtgagccttg
3061 tggccaatgg gggacccccc aagagccagc ttggacaatg ctcttcttgc cccttagtta
3121 ctggctggct gtggcttcag tggtgtgtaa gcaggtggaa tactcaccca ccaagctctg
3181 gggtaccccg agggcctgaa aagaggatgg ggtgggggtg gcatcctcca aagaccagcc
3241 tccaccccca ctccagcctc agcggggccc cagcgatgtt ttcttgttgt acaagaacca
3301 ggtccgagtg ttgcctcctc ttccttccgg aagccaaact gctcctttat tttttagagc
3361 tgctgattgt gaatctcaga gtcttaagag agaagccaaa tatattcctc ttgtaaatga
3421 agaaataaac ctatttaaac caaaaaaaaa aaaaaaa
//