LOCUS       BC041369                2145 bp    mRNA    linear   HUM 12-JAN-2007
DEFINITION  Homo sapiens sphingomyelin synthase 2, mRNA (cDNA clone MGC:43860
            IMAGE:5273650), complete cds.
ACCESSION   BC041369
VERSION     BC041369.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2145)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-DEC-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Sep 16, 2003 this sequence version replaced BC041369.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 75 Row: e Column: 15
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 37059795.
FEATURES             Location/Qualifiers
     source          1..2145
                     /db_xref="H-InvDB:HIT000052548"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:43860 IMAGE:5273650"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..2145
                     /gene="MGC26963"
                     /gene_synonym="SMS2"
                     /db_xref="GeneID:166929"
     CDS             633..1730
                     /gene="MGC26963"
                     /gene_synonym="SMS2"
                     /codon_start=1
                     /product="sphingomyelin synthase 2"
                     /protein_id="AAH41369.1"
                     /db_xref="GeneID:166929"
                     /translation="MDIIETAKLEEHLENQPSDPTNTYARPAEPVEEENKNGNGKPKS
                     LSSGLRKGTKKYPDYIQIAMPTESRNKFPLEWWKTGIAFIYAVFNLVLTTVMITVVHE
                     RVPPKELSPPLPDKFFDYIDRVKWAFSVSEINGIILVGLWITQWLFLRYKSIVGRRFC
                     FIIGTLYLYRCITMYVTTLPVPGMHFQCAPKLNGDSQAKVQRILRLISGGGLSITGSH
                     ILCGDFLFSGHTVTLTLTYLFIKEYSPRHFWWYHLICWLLSAAGIICILVAHEHYTID
                     VIIAYYITTRLFWWYHSMANEKNLKVSSQTNFLSRAWWFPIFYFFEKNVQGSIPCCFS
                     WPLSWPPGCFKSSCKKYSRVQKIGEDNEKST"
BASE COUNT          644 a          424 c          456 g          621 t
ORIGIN      
        1 aataaatgga gtttcaaaat cacaagcttc tttcccacat gaacataaga ctaggagcac
       61 atatggaaga gtaaagttga agggaatttg gatgatgatt tggcaagatg ctgtaagtgg
      121 attaggcaag gctgctaaag agagacagga aatggctgtg ttagtgcttc ggacctccgt
      181 tagaagtagc agttcatggt gttgaaggtt tgttgttgaa aataccttcc tgaggcacct
      241 cttcattgtg cttattcttc ccacaacatt gtgccaagac actgtcaagc ctgggcctgt
      301 caaagcctgg gatgtcaaag gcctgggtct ttctcatcct gctgtaatgt attgatagct
      361 gggggctctg cagaaggaca agggaaaggt gggatagtaa catctttttg agggaagaat
      421 tggcttcctt tcttgaaagt ggtgaaggta cagcatatag ctgcatggaa gaaacagtaa
      481 tcggatggct accttctaca ttttgtatta ggaaacaaag tccattgtaa gagtccatgt
      541 tgatcttgga aatagaagga ttgaaaaaag ctaaatttcc acaaagaaca agaacttgac
      601 catctccttt ttgatctgaa gactagggga caatggatat catagagaca gcaaaacttg
      661 aagaacattt ggaaaatcaa cccagtgatc ctacgaacac ttatgcaaga cccgctgaac
      721 ctgttgaaga agaaaacaaa aatggcaatg gtaaacccaa gagcttatcc agtgggctgc
      781 gaaaaggcac caaaaagtac ccggactata tccaaattgc tatgcccact gaatcaagga
      841 acaaatttcc actagagtgg tggaaaacgg gcattgcctt catatatgca gttttcaacc
      901 tcgtcttgac aaccgtcatg atcacagttg tacatgagag ggtccctccc aaggagctta
      961 gccctccact cccagacaag ttttttgatt acattgatag ggtgaaatgg gcattttctg
     1021 tatcagaaat aaatgggatt atattagttg gattatggat cacccagtgg ctgtttctga
     1081 gatacaagtc aatagtggga cgcagattct gttttattat tggaacttta tacctgtatc
     1141 gctgcattac aatgtatgtt actactctac ctgtgcctgg aatgcatttc cagtgtgctc
     1201 caaagctcaa tggagactct caggcaaaag ttcaacggat tctacgattg atttctggtg
     1261 gtggattgtc cataactgga tcacatatct tatgtggaga cttcctcttc agcggtcaca
     1321 cggttacgct gacactgact tatttgttca tcaaagaata ttcgcctcgt cacttctggt
     1381 ggtatcattt aatctgctgg ctgctgagtg ctgccgggat catctgcatt cttgtagcac
     1441 acgaacacta cactatcgat gtgatcattg cttattatat cacaacacga ctgttttggt
     1501 ggtaccattc aatggccaat gaaaagaact tgaaggtctc ttcacagact aatttcttat
     1561 ctcgagcatg gtggttcccc atcttttatt tttttgagaa aaatgtacaa ggctcaattc
     1621 cttgctgctt ctcctggccg ctgtcttggc ctcctggctg cttcaaatca tcatgcaaaa
     1681 agtattcacg ggttcagaag attggtgaag acaatgagaa atcgacctga ggagcaaaac
     1741 aaaggcatca gctcttacac caaaagagtt aacgctgtaa ccaaaggtat agttttgttt
     1801 tttattttag gagaactgac tggtaaatga agaaatggac caaattttgt gtaaacgatt
     1861 agaaagatga acaaagtatt gccctttgac tggttttctt cttcatcctg agaaagatac
     1921 attctcttgc agctcttcat tcattggtga caagccccca ccccgggact ttactaatga
     1981 gcttgttaaa gaggtgccaa agaacatatt cctcctttct ttattctttc tccaccaaaa
     2041 ccctctactt cagaattttt tcaggatatt tttcagccca aggtcagaag aatgtgttaa
     2101 tattttaaat aaaatatctg gacatctaca aaaaaaaaaa aaaaa
//