LOCUS BC041093 4666 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens R3H domain containing 1, mRNA (cDNA clone MGC:46099
IMAGE:5556247), complete cds.
ACCESSION BC041093
VERSION BC041093.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4666)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4666)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: b Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543534.
FEATURES Location/Qualifiers
source 1..4666
/db_xref="H-InvDB:HIT000052501"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46099 IMAGE:5556247"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4666
/gene="R3HDM1"
/gene_synonym="KIAA0029"
/db_xref="GeneID:23518"
/db_xref="HGNC:HGNC:9757"
CDS 371..3670
/gene="R3HDM1"
/gene_synonym="KIAA0029"
/codon_start=1
/product="R3H domain containing 1"
/protein_id="AAH41093.1"
/db_xref="GeneID:23518"
/db_xref="HGNC:HGNC:9757"
/translation="MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVE
KNEHCIENNIDLQRPLQSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQE
KIQIQLTQSFEKEEKPSKDEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNT
LKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQ
SGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKD
DRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNK
DASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGD
SSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTH
SSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPP
MTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQDNLGSQFSHMSLARQPSADGSDPHA
AMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPV
SQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQT
GYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQG
SQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSEQ
VQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNKY
YCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLKTVRPSGPPLSIM
PQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRHGNRGRRQAKKAA
STDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPRRHPL
CCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINSVNKFKLRTSKKHY
DFHILERASSQ"
BASE COUNT 1421 a 1170 c 911 g 1164 t
ORIGIN
1 cggtgtccgg gctggtgatg gggttaattc cctttcgtaa gactcttact tgcacccacc
61 cagccccgcc gtcgccccgc cgcgccgcgc tccaaccgcc tcctcctcct cagtaacgcg
121 ggccacggaa aggtatgata tatttgatcc aagacagtcc attccagtcc gggaatctac
181 agtggtgaca aggacatggg actcctcctg ccagattaca gatggttcac tacagttgac
241 atcctggctg acaactgtga aaaagaacct tggattattt tattttattt ttgtgggaca
301 ccacaatccc aaatccaaag gacgcatcag gcttcaagct ccctgtagaa ttcgaaaata
361 accttttcta atgaggatgt ctgatactgt tactgtaaaa gatgaaactg caacaatgaa
421 ggatttggag gcagaagtga aagatacaac cagagttgaa aatcttatca aatcagaaaa
481 ctatgggaag attttggtag agaagaatga acattgtatt gagaacaata tagatttgca
541 gcggccattg cagtcatttg gacagacagg aaaaaggtct aagtcaagct caaagttaaa
601 gctagttcgg agccttgcag tgtgtgaaga atctccacca ccccctgcac cagagatatc
661 acaggagaac caggagaaaa ttcagatcca gttaacacaa tcatttgaga aagaagagaa
721 gccctcaaaa gatgaagcag aaaaagaaaa ggccagtgat aagttgccca gaaaaatgtt
781 atcaagagat tccagtcaag aatacactga ttcaactggc atagatctac atgaattttt
841 agtaaataca ttaaaaaaca atcccaggga cagaatgatg ctgctgaaat tggaacaaga
901 aattttagat ttcattggta ataatgagtc tccacgtaaa aaattccccc caatgacatc
961 ttaccatagg atgctattac acagagtagc cgcttacttt ggattagacc acaatgttga
1021 tcagagtggg aagtctgtca tagtaaacaa aactagcaat acaagaatac ctgatcagaa
1081 atttaatgaa catattaagg atgataaagg tgaagacttt cagaaacgtt atatcctcaa
1141 gagagataac tctagctttg acaaagatga taaccagatg agaatacgtt tgaaagatga
1201 cagaagaagc aaatctatag aagaaagaga agaagagtac cagagagcca gagaccgaat
1261 attttcccaa gattccctgt gttcccaaga gaattacatt attgacaaaa gactccaaga
1321 cgaggatgcc agtagtaccc agcagaggcg ccagatattt agagttaata aagatgcttc
1381 agggagatct acaaatagcc atcaaagcag cactgagaat gagttgaagt actcggaacc
1441 acgaccctgg agcagcacag attcagacag ctctcttcga aacctgaaac ctgctgtaac
1501 caaagccagc agcttcagtg gaatctcagt cctgacaaga ggtgatagtt ctggaagcag
1561 caaaagcata ggcaggcttt caaaaacagg ttctgagtct tctggtagtg tagggtcatc
1621 tacaggctct ctttctcaca tccagcagcc tcttccaggt acagctctca gccagtcttc
1681 tcatggcgca cctgtcgtct atccaactgt cagcactcat agttctcttt cctttgatgg
1741 tggcctaaat gggcaagtcg catctcctag cactagcttc tttttgcttc ccttggaagc
1801 ggcaggcata ccacctggca gtattctgat caacccacaa acaggtcagc ccttcataaa
1861 cccagatggg agtccagttg tgtataatcc tcctatgact caacaaccag ttagatccca
1921 agtgcctgga cctccacagc cacctctgcc agccccacct caacaaccag cagctaatca
1981 cattttctca caggataacc tagggtctca gtttagccac atgagtcttg ctcgccagcc
2041 atctgctgat ggttctgacc ctcatgccgc catgttccag tccactgtgg ttcttcagtc
2101 tccacagcag tctggttata tcatgacagc agcccctcca ccacatcctc ctccaccgcc
2161 accaccacca cctcctcctc ctcccctacc acctgggcag ccagtcccta ctgctggata
2221 tcctgcctct ggtcatcctg tcagccagcc tgtgctccag cagcagggat atattcagca
2281 gccatcacca cagatgccag cctgttattg cgctccaggc cactatcact ccagccaacc
2341 tcagtatcgc ccagtccctt ctgttcatta caattcacat ctaaaccaac cactgccaca
2401 acctgcgcag cagacaggtt atcaagttat acccaaccag cagcaaaact accaaggaat
2461 agttggagtt cagcaacccc agagtcagag cctagtcagt ggccaaccca acagcattgg
2521 aaatcagatt caaggagtgg tcatccccta tacttcagtg ccaacatatc aggtttcact
2581 gcctcaaggt tctcaaggaa ttccccatca gacttatcaa cagcctgtta tgttccctaa
2641 tcagtctaat caaggatcta tgcccacaac aggaatgcct gtttactata gtgtcattcc
2701 acctggtcaa caaaacaatt taagctcttc agtaggttac ctgcaacatc caggatcaga
2761 acaagtacaa tttcctcgaa ccacttcacc atgcagttcc cagcagcttc aaggccacca
2821 atgtacagct ggaccaccac cgccacctgg tggggggatg gtgatgatgc agctcagtgt
2881 accaaacaat ccacaatctt gtgcccactc acccccgcag tggaaacaaa acaaatatta
2941 ctgtgatcac cagagaggac agaagtgtgt agaatttagc agtgtagaca atattgtcca
3001 gcacagccct caactcagta gccccattat ttcaccagct cagtcgccag caccagctca
3061 gctgtccacc ctgaaaactg tacgtccctc tggaccacca ctttccatca tgccccaatt
3121 ttctagacct tttgtccccg ggcaaggaga ttccaggtat ccattacttg gccagccact
3181 gcagtacaat cctcctgctg ttctgcacgg acacattcca aaccaacagg gtcagcctgg
3241 cagcaggcat ggaaaccgag gaaggagaca agctaaaaaa gctgcatcca cagaccttgg
3301 agcaggagaa acagttgttg ggaaggtctt ggaaattact gaactaccag atggaataac
3361 tcgcatggaa gctgaaaagc tttttgggga actctttaaa attggcgcca agatccggtg
3421 gctccgggac ccccagtccc aaccacgtcg tcaccccctc tgctgtggca gtggggacaa
3481 cactgccaac cctgaacgct ctaaacccag tgacttggcc tccacctaca ccgtcttagc
3541 cacattcccc tccatttcag ctgcacagaa tgcactgaag aaacaaatta actcagttaa
3601 caagtttaag ctgagaacaa gcaagaagca ctatgacttt cacattttgg aaagggcaag
3661 ttctcagtaa cagccacctt tggacccttc gcctttatgg ttcccctgcc ctctcccatc
3721 tttgattggc ttggtatttg gagcttctgt taacattata gagactccta ggatgtgtgt
3781 tcatggcatt atagcctttg aagaaaggcc agtgatccag caaaggggga aaaatatgca
3841 tttcacccca catgactagg aatccacatc agaatgatac agagttagca ggtttttcta
3901 aggaaatgcc attcaaatgc ctcctaactt ttatagttat tttgttttat atttctaaat
3961 tcttgtatca gatccaaagc tctattgtac agcaaattat tcttcaaaat gattataacc
4021 agttgcaccc tgtatttctt tttgcagcca gcacaatgtg acccaactta aaatttgggg
4081 gaaaaagaat gcaggagtga aataaccaag tcaaaaccat gtactatctc cttgggggtt
4141 agggatgcta agaagagccc acaaatagag gattactctt cccctgaatc tctaaactca
4201 gaaacaatta ccaaaaaata cataactctt ccttgtaggg ccctttcctt attcatttag
4261 gtagtgtgaa cattaagtat aaaataaatt atgttcttaa tgcctcttaa accacttaca
4321 ttcaaagggg aacagaaatc attctaagca ggaaaatact tccacttttt ttttttcaag
4381 tatctctcta ataactaaat gccacttatt tgcattctcc ttgtggattt tttgtcacct
4441 aaggaaatgc atttgatgag tgctggaaac ttcttaagtg ctttacagtt tgttttcatt
4501 gtttgcagcg gatcactgga catcaaagat tcattgcact tatgaacaag gaaccttctt
4561 ttcaatttct gtgtaatttg caaggctgta caatgtgtgc tgatgcaagc ctttttcagt
4621 tcaagagaat aaatgtttac aaatataaaa aaaaaaaaaa aaaaaa
//