LOCUS BC040227 1853 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens CKLF-like MARVEL transmembrane domain containing 3,
mRNA (cDNA clone MGC:35408 IMAGE:5187826), complete cds.
ACCESSION BC040227
VERSION BC040227.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1853)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1853)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: h Column: 14.
FEATURES Location/Qualifiers
source 1..1853
/db_xref="H-InvDB:HIT000096076"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35408 IMAGE:5187826"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1853
/gene="CMTM3"
/gene_synonym="BNAS2"
/gene_synonym="FLJ31762"
/gene_synonym="MGC51956"
/db_xref="GeneID:123920"
/db_xref="HGNC:HGNC:19174"
/db_xref="MIM:607886"
CDS 94..642
/gene="CMTM3"
/gene_synonym="BNAS2"
/gene_synonym="FLJ31762"
/gene_synonym="MGC51956"
/codon_start=1
/product="CKLF-like MARVEL transmembrane domain containing
3"
/protein_id="AAH40227.2"
/db_xref="GeneID:123920"
/db_xref="HGNC:HGNC:19174"
/db_xref="MIM:607886"
/translation="MWPPDPDPDPDPEPAGGSRPGPAVPGLRALLPARAFLCSLKGRL
LLAESGLSFITFICYVASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMD
FLRCVTAALIYFAISITAIAKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ
GDSADETTAHKTEEENSDSDSD"
BASE COUNT 449 a 544 c 454 g 406 t
ORIGIN
1 tgccctcctt ccgcacagcc cgggtttccg cttccctccg ggcgcgagaa gaggggagcc
61 aggccgagcc ccggccctac cgccgccgcc gccatgtggc ccccagaccc cgaccccgac
121 ccggaccccg agcctgccgg cggctcccgt cccggccccg cggtccccgg gctccgcgcc
181 ctgctgccgg cgcgggcttt cctctgctct ctcaaaggcc gcctcctgct ggccgagtcg
241 ggtctctcat tcatcacttt tatctgctat gtggcgtcct cagcatctgc cttcctcaca
301 gcgcctctgc tggagttcct gctggccttg tacttcctct ttgctgatgc catgcagctg
361 aatgacaagt ggcagggctt gtgctggccc atgatggact tcctgcgctg tgtcaccgcg
421 gccctcatct actttgctat ctccatcacg gccatcgcca agtactcgga tggggcttcc
481 aaagccgctg gggtgtttgg cttctttgct accatcgtgt ttgcaactga tttctacctg
541 atctttaacg acgtggccaa attcctcaaa caaggggact ctgcagatga gaccacagcc
601 cacaagacag aagaagagaa ttccgactcg gactctgact gaaggcctgg cgggtgcctt
661 ggcaacctga gccacacagg cctccacccc tgcgcctcac aggggtcgct ggcgttggag
721 cggaggcctg gacttctgag ttgcagaggg ggctgcggac acagcaggcc ccctacagcc
781 tcaggttctg cctgagccca gcctaccagg cttgcccctc agctcagcac tgttgaccac
841 gctgcgtatg agggcatctt gggtatccca ctccttctcc ccatttctgt cccacaggcc
901 ttcagccctt taacgtctct gccaaaaacc agcacaagga gacaaagcag agccttgtct
961 gtatctgggc agcaggtgtt ccatgctgct aggtggcggg ggtcgggggt cttctgtttc
1021 actaacagga acaaagacag aaaccatgac agggctgccc cgccaggccc cggtgggttt
1081 gtctgcactt ggtgctcctg cccacaccag ccactttggt gacaatgacc cttccaagaa
1141 tctttggttc aaggagcacc agttccctct tcattcttga agcagggaga aattgacctt
1201 tgccttgtcg cccaggaagt ggggctcggc acccataact aacacctccc acccttggaa
1261 accatgtctt ctgggggtga gatgaccatt ctgggtctaa gactgtttca aagaagagct
1321 catagactga ctggtccaga agacagaggg tacaacagtg gcatcacagt gacagtgtca
1381 tggggagctg ggcgggccca gccaaaccct ccttcttcct agagcccagc cagcaggcag
1441 gagttcctgg accctcagga cagtgaactt ccagacctca gggcaggtct atgggccact
1501 gcaggagatg agaccagcct tctgtgttca cctaacgatt tatactgtgt atctgtcttt
1561 gatggaattt tgtaactttt tatatttttt tatgcaaaag cagcttctta acagatggca
1621 ttttctgtga ctctaggcct cacaaaagag ccagagttct ggacccatgt ttggagcatt
1681 tgtagcctta ttctcttgcg tgtgaatctc ttaccctgaa aaaaagccat aatgaattaa
1741 gccagactga caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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