LOCUS BC040194 3076 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens amine oxidase (flavin containing) domain 2, mRNA (cDNA
clone MGC:42279 IMAGE:4815528), complete cds.
ACCESSION BC040194
VERSION BC040194.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3076)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3076)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC040194.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 70 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58761545.
FEATURES Location/Qualifiers
source 1..3076
/db_xref="H-InvDB:HIT000096059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42279 IMAGE:4815528"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3076
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/gene_synonym="LSD1"
/db_xref="GeneID:23028"
/db_xref="HGNC:HGNC:29079"
/db_xref="IMGT/GENE-DB:29079"
/db_xref="MIM:609132"
CDS 105..2735
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/gene_synonym="LSD1"
/codon_start=1
/product="AOF2 protein"
/protein_id="AAH40194.3"
/db_xref="GeneID:23028"
/db_xref="HGNC:HGNC:29079"
/db_xref="IMGT/GENE-DB:29079"
/db_xref="MIM:609132"
/translation="MLSGKKAAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGL
SGPAEVGPGAVGERTPRKKEPPRASPPGGLAEPQGSAGPQAGPTVVPGSATPMETGIA
ETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPP
EEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPD
IISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYL
ERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG
GRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQADTV
KVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDE
QIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKH
RDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANAT
PLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGC
EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGN
LNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIME
NISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYD
LMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGA
MYTLPRQATPGVPAQQSPSM"
BASE COUNT 835 a 714 c 841 g 686 t
ORIGIN
1 gggggcgcgc gggcagcgtg aagcgaggcg aggcaaggct tttcggaccc acggagcgac
61 agagcgagcg gcccctacgg ccgtcggcgg cccggcggcc agagatgtta tctgggaaga
121 aggcggcagc cgcggcggcg gcggctgcag cggcagcaac cgggacggag gctggccctg
181 ggacagcagg cggctccgag aacgggtctg aggtggccgc gcagcccgcg ggcctgtcgg
241 gcccagccga ggtcgggccg ggggcggtgg gggagcgcac accccgcaag aaagagcctc
301 cgcgggcctc gccccccggg ggcctggcgg aaccgcaggg gtccgcaggg cctcaggccg
361 gccctactgt cgtgcctggg tctgcgaccc ccatggaaac tggaatagca gagactccgg
421 aggggcgtcg gaccagccgg cgcaagcggg cgaaggtaga gtacagagag atggatgaaa
481 gcttggccaa cctctcagaa gatgagtatt attcagaaga agagagaaat gccaaagcag
541 agaaggaaaa gaagcttccc ccaccacccc ctcaagcccc acctgaggaa gaaaatgaaa
601 gtgagcctga agaaccatcg gggcaagcag gaggacttca agacgacagt tctggagggt
661 atggagacgg ccaagcatca ggtgtggagg gcgcagcttt ccagagccga cttcctcatg
721 accggatgac ttctcaagaa gcagcctgtt ttccagatat tatcagtgga ccacaacaga
781 cccagaaggt ttttcttttc attagaaacc gcacactgca gttgtggttg gataatccaa
841 agattcagct gacatttgag gctactctcc aacaattaga agcaccttat aacagtgata
901 ctgtgcttgt ccaccgagtt cacagttatt tagagcgtca tggtcttatc aacttcggca
961 tctataagag gataaaaccc ctaccaacta aaaagacagg aaaggtaatt attataggct
1021 ctggggtctc aggcttggca gcagctcgac agttacaaag ttttggaatg gatgtcacac
1081 ttttggaagc cagggatcgt gtgggtggac gagttgccac atttcgcaaa ggaaactatg
1141 tagctgatct tggagccatg gtggtaacag gtcttggagg gaatcctatg gctgtggtca
1201 gcaaacaagt aaatatggaa ctggccaaga tcaagcaaaa atgcccactt tatgaagcca
1261 acggacaagc tgacactgtc aaggttccta aagagaaaga tgaaatggta gagcaagagt
1321 ttaaccggtt gctagaagct acatcttacc ttagtcatca actagacttc aatgtcctca
1381 ataataagcc tgtgtccctt ggccaggcat tggaagttgt cattcagtta caagagaagc
1441 atgtcaaaga tgagcagatt gaacattgga agaagatagt gaaaactcag gaagaattga
1501 aagaacttct taataagatg gtaaatttga aagagaaaat taaagaactc catcagcaat
1561 acaaagaagc atctgaagtg aagccaccca gagatattac tgccgagttc ttagtgaaaa
1621 gcaaacacag ggatctgacc gccctatgca aggaatatga tgaattagct gaaacacaag
1681 gaaagctaga agaaaaactt caggagttgg aagcgaatcc cccaagtgat gtatatctct
1741 catcaagaga cagacaaata cttgattggc attttgcaaa tcttgaattt gctaatgcca
1801 cacctctctc aactctctcc cttaagcact gggatcagga tgatgacttt gagttcactg
1861 gcagccacct gacagtaagg aatggctact cgtgtgtgcc tgtggcttta gcagaaggcc
1921 tagacattaa actgaataca gcagtgcgac aggttcgcta cacggcttca ggatgtgaag
1981 tgatagctgt gaatacccgc tccacgagtc aaacctttat ttataaatgc gacgcagttc
2041 tctgtaccct tcccctgggt gtgctgaagc agcagccacc agccgttcag tttgtgccac
2101 ctctccctga gtggaaaaca tctgcagtcc aaaggatggg atttggcaac cttaacaagg
2161 tggtgttgtg ttttgatcgg gtgttctggg atccaagtgt caatttgttc gggcatgttg
2221 gcagtacgac tgccagcagg ggtgagctct tcctcttctg gaacctctat aaagctccaa
2281 tactgttggc actagtggca ggagaagctg ctggtatcat ggaaaacata agtgacgatg
2341 tgattgttgg ccgatgcctg gccattctca aagggatttt tggtagcagt gcagtacctc
2401 agcccaaaga aactgtggtg tctcgttggc gtgctgatcc ctgggctcgg ggctcttatt
2461 cctatgttgc tgcaggatca tctggaaatg actatgattt aatggctcag ccaatcactc
2521 ctggcccctc gattccaggt gccccacagc cgattccacg actcttcttt gcgggagaac
2581 atacgatccg taactaccca gccacagtgc atggtgctct gctgagtggg ctgcgagaag
2641 cgggaagaat tgcagaccag tttttggggg ccatgtatac gctgcctcgc caggccacac
2701 caggtgttcc tgcacagcag tccccaagca tgtgagacag atgcattcta agggaagagg
2761 cccatgtgcc tgtttctgcc atgtaaggaa ggctcttcta gcaatactag atcccactga
2821 gaaaatccac gctggcatct gggctcctga tcagctgatg gagctcctga tttgacaaag
2881 gagcttgcct cctttgaatg acctagagca cagggaggaa cttgtccatt agtttggaat
2941 tgtgttcttc gtaaagactg aggcaagcaa gtgctgtgaa ataacatcat cttagtccct
3001 tggtgtgtgg ggtttgtttt ttttttttta tattttgaga ataaaacttc atataaaatt
3061 agaaaaaaaa aaaaaa
//