LOCUS BC040043 857 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens steroid receptor RNA activator 1, mRNA (cDNA clone
IMAGE:5504902), partial cds.
ACCESSION BC040043
VERSION BC040043.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 857)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 857)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC040043.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 89 Row: d Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..857
/db_xref="H-InvDB:HIT000052307"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5504902"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..857
/gene="SRA1"
/gene_synonym="pp7684"
/gene_synonym="SRA"
/gene_synonym="STRAA1"
/db_xref="GeneID:10011"
/db_xref="MIM:603819"
CDS <1..648
/gene="SRA1"
/gene_synonym="pp7684"
/gene_synonym="SRA"
/gene_synonym="STRAA1"
/codon_start=1
/product="SRA1 protein"
/protein_id="AAH40043.2"
/db_xref="GeneID:10011"
/db_xref="MIM:603819"
/translation="ATRNAAGTPPQFSYGLQTQAGGPRRSLLTKRVAAPQDGSPRVPA
SETSPGPPPMGPPPPSSKAPRSPPVGSGPASGVEPTSFPVESEAVMEDVLRPLEQALE
DCRGHTRKQVCDDISRRLALLQEQWAGGKLSIPVKKRMALLVQELSSHRWDAADDIHR
SLMVDHVTEVSQWMVGVKRLIAEKRSLFSEEAANEEKSAATAEKNHTIPGFQQAS"
BASE COUNT 219 a 243 c 230 g 165 t
ORIGIN
1 gcaacaagga acgcggctgg aaccccgccg cagttctcat acgggctgca gacccaggcc
61 ggcggaccca ggcgctcgct gcttaccaag agggtcgccg caccccagga tggatccccc
121 agagtccccg catcagagac ttctcctggg cctcccccaa tggggcctcc acctccttca
181 agtaaggctc ccaggtcccc acctgtgggg agtggtcctg cctctggcgt ggagcccaca
241 agtttcccag tcgagtctga ggctgtgatg gaggatgtgc tgagaccttt ggaacaggca
301 ttggaagact gccgtggcca cacaaggaag caggtatgtg atgacatcag ccgacgcctg
361 gcactgctgc aggaacagtg ggctggagga aagttgtcaa tacctgtaaa gaagagaatg
421 gctctactgg tgcaagagct ttcaagccac cggtgggacg cagcagatga catccaccgc
481 tccctcatgg ttgaccatgt gactgaggtc agtcagtgga tggtaggagt taaaagatta
541 attgcagaaa agaggagtct gttttcagag gaggcagcca atgaagagaa atctgcagcc
601 acagctgaga agaaccatac cataccaggc ttccagcagg cttcataatc ctcggttccc
661 cagactcacc ggacaccatc tcctatgcct tggagacctt ctgtcacttg gctcccttct
721 taccaccacc aagactgtcc cactgggcct gacccaccta tgagggaaga agtcccacct
781 gggccagagg gagttcatgt gttactcata acatgcattt caataaaaac atctctgcgg
841 tgaaaaaaaa aaaaaaa
//